Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ArgR regulog to Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Reference regulog properties
Source regulog: ArgR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor, activator
Biological process: Arginine degradation; Arginine biosynthesis
Effector: Arginine
Phylum: Firmicutes
Propagated regulon:
Target genome Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Orthologous TF(s) LEUM_1600, LEUM_1214
Regulated genes 10
Built upon 27 sites [see more]
Predicted regulatory interactions in Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Locus tag Position Score Sequence
Position: -8
Score: 3.5
Sequence: AAAGTCTAATGAAAAAAA
Locus tag: LEUM_0058
LEUM_0058 -8 3.5 AAAGTCTAATGAAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argB
Ortholog function: Acetylglutamate kinase (EC 2.7.2.8)
Lactobacillus fermentum IFO 3956 LAF_0724 -220 4.9 TGTGTATAAATATTTAGT
Lactobacillus plantarum WCFS1 lp_0530 -117 4.5 AATGAATATTTTTTCAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0058 -71 3.4 TTTGCATATTTATTGTAT
Position: -31
Score: 3.9
Sequence: AACGTCTAAAAATATACT
Position: -29
Score: 3.7
Sequence: CGTCTAAAAATATACTTA
Position: -23
Score: 3.6
Sequence: AAAATATACTTAGGAAAA
Position: 11
Score: 3.7
Sequence: ATTAAATCAAATTACAAC
Locus tag: LEUM_0059
LEUM_0059 -31 3.9 AACGTCTAAAAATATACT
-29 3.7 CGTCTAAAAATATACTTA
-23 3.6 AAAATATACTTAGGAAAA
11 3.7 ATTAAATCAAATTACAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: argJ
Ortholog function: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)
Lactobacillus fermentum IFO 3956 LAF_0725 -220 4.9 TGTGTATAAATATTTAGT
Lactobacillus plantarum WCFS1 lp_0529 -117 4.5 AATGAATATTTTTTCAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0059 -71 3.4 TTTGCATATTTATTGTAT
Position: -112
Score: 3.9
Sequence: AGTGTTTTTTTATACATT
Position: -101
Score: 4
Sequence: ATACATTAAATTTAAAAT
Position: -94
Score: 3.7
Sequence: AAATTTAAAATATCCAAT
Position: -71
Score: 3.4
Sequence: TTTGCATATTTATTGTAT
Position: -60
Score: 3.6
Sequence: ATTGTATTTAAATGCTTA
Position: -43
Score: 3.8
Sequence: ATTGGTTTAATATTTAAA
Position: 10
Score: 3.5
Sequence: AAATTATAAAAATTGCTA
Locus tag: LEUM_0060
LEUM_0060 -112 3.9 AGTGTTTTTTTATACATT
-101 4 ATACATTAAATTTAAAAT
-94 3.7 AAATTTAAAATATCCAAT
-71 3.4 TTTGCATATTTATTGTAT
-60 3.6 ATTGTATTTAAATGCTTA
-43 3.8 ATTGGTTTAATATTTAAA
10 3.5 AAATTATAAAAATTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Lactobacillus fermentum IFO 3956 LAF_0726 -220 4.9 TGTGTATAAATATTTAGT
Lactobacillus plantarum WCFS1 lp_0528 -117 4.5 AATGAATATTTTTTCAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0060 -71 3.4 TTTGCATATTTATTGTAT
Position: -135
Score: 3.5
Sequence: ATAGTCTCCATATATAGT
Position: -101
Score: 4.1
Sequence: TATGCAATATTATACAAT
Position: -86
Score: 3
Sequence: AATGTATTCAGTTTAATA
Position: -63
Score: 3.3
Sequence: AACAGATGCATATAAATT
Position: -59
Score: 3
Sequence: GATGCATATAAATTATAA
Position: -53
Score: 3.2
Sequence: TATAAATTATAACACTGT
Position: -50
Score: 3.1
Sequence: AAATTATAACACTGTATA
Position: -40
Score: 3.6
Sequence: ACTGTATAATAGTAATTA
Position: -37
Score: 3.1
Sequence: GTATAATAGTAATTAACA
Position: -35
Score: 3
Sequence: ATAATAGTAATTAACATT
Position: -14
Score: 3.2
Sequence: AATGGAGATTAATAATGA
Position: 7
Score: 3.8
Sequence: AGTTATTGAATATAAAAA
Position: 11
Score: 3.3
Sequence: ATTGAATATAAAAAACTT
Position: 15
Score: 3.1
Sequence: AATATAAAAAACTTGAAA
Position: 16
Score: 3
Sequence: ATATAAAAAACTTGAAAA
Locus tag: LEUM_0629
LEUM_0629 -135 3.5 ATAGTCTCCATATATAGT
-101 4.1 TATGCAATATTATACAAT
-86 3 AATGTATTCAGTTTAATA
-63 3.3 AACAGATGCATATAAATT
-59 3 GATGCATATAAATTATAA
-53 3.2 TATAAATTATAACACTGT
-50 3.1 AAATTATAACACTGTATA
-40 3.6 ACTGTATAATAGTAATTA
-37 3.1 GTATAATAGTAATTAACA
-35 3 ATAATAGTAATTAACATT
-14 3.2 AATGGAGATTAATAATGA
7 3.8 AGTTATTGAATATAAAAA
11 3.3 ATTGAATATAAAAAACTT
15 3.1 AATATAAAAAACTTGAAA
16 3 ATATAAAAAACTTGAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: artM
Ortholog function: Arginine ABC transporter, ATP-binding protein
Lactobacillus brevis ATCC 367 LVIS_1201 -161 4.6 AATGTATAAATTTTTATA
-96 4.9 AGTGTATAAAAATAGATA
Lactobacillus casei ATCC 334 LSEI_1345 -56 4.2 ATTGCATAAAAATCAATT
Lactobacillus fermentum IFO 3956 LAF_0624 -63 3.6 CTTGCATAATAATTCGTT
Lactobacillus plantarum WCFS1 lp_2110 -17 3.8 CTTGCATAAATAATCATA
Lactobacillus reuteri JCM 1112 LAR_0697 -253 4.7 ATTGCATAAATAAACATT
Lactobacillus rhamnosus GG LGG_01357 -56 4.3 ATTGCATAAAAATTGAAT
Lactobacillus sakei subsp. sakei 23K LSA1056 -55 4.5 ATTGCATAAATATTTATA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1540 -162 3.5 GTTACATAAATATATTTT
-82 4.3 CTTGCATAAATAAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0629 -59 3 GATGCATATAAATTATAA
Pediococcus pentosaceus ATCC 25745 PEPE_1136 -94 5.2 AATGTATAAAAATTCATA
Position: -105
Score: 4.1
Sequence: AAAATTTAGTTATTCAAT
Position: -62
Score: 5.3
Sequence: ATTGTATAAAAATTCAAA
Position: 4
Score: 3.9
Sequence: ATAGTATATTAAAAAAAA
Locus tag: LEUM_0655
LEUM_0655 -105 4.1 AAAATTTAGTTATTCAAT
-62 5.3 ATTGTATAAAAATTCAAA
4 3.9 ATAGTATATTAAAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: artPQ
Ortholog function: Arginine ABC transporter, substrate-binding and permease protein
Lactobacillus brevis ATCC 367 LVIS_1200 -161 4.6 AATGTATAAATTTTTATA
-96 4.9 AGTGTATAAAAATAGATA
Lactobacillus casei ATCC 334 LSEI_2810 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus casei ATCC 334 LSEI_1344 -56 4.2 ATTGCATAAAAATCAATT
Lactobacillus plantarum WCFS1 lp_2111 -17 3.8 CTTGCATAAATAATCATA
Lactobacillus reuteri JCM 1112 LAR_0698 -253 4.7 ATTGCATAAATAAACATT
Lactobacillus rhamnosus GG LGG_02816 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus rhamnosus GG LGG_01356 -56 4.3 ATTGCATAAAAATTGAAT
Lactobacillus sakei subsp. sakei 23K LSA1057 -55 4.5 ATTGCATAAATATTTATA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1541 -162 3.5 GTTACATAAATATATTTT
-82 4.3 CTTGCATAAATAAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0655 -62 5.3 ATTGTATAAAAATTCAAA
Pediococcus pentosaceus ATCC 25745 PEPE_1137 -94 5.2 AATGTATAAAAATTCATA
Position: -10
Score: 3.2
Sequence: AATGAATAATATGAGTGA
Locus tag: LEUM_1458
LEUM_1458 -10 3.2 AATGAATAATATGAGTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argH
Ortholog function: Argininosuccinate lyase (EC 4.3.2.1)
Lactobacillus casei ATCC 334 LSEI_2812 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus fermentum IFO 3956 LAF_1624 -136 2.3 CTTGCATTTTTATTTGAT
Lactobacillus plantarum WCFS1 lp_0776 -139 4.1 TCTGCATAAAAATTCTAT
Lactobacillus reuteri JCM 1112 LAR_0703 -164 4.7 ATTAAATAATTATTCTAT
Lactobacillus rhamnosus GG LGG_02818 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0305 -47 3.5 AATGAATAGATTATGAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1458 -73 3.8 ATTGCATATTTAATCAAA
Position: -189
Score: 3
Sequence: ACAGTACAATTAATAAAG
Position: -185
Score: 2.9
Sequence: TACAATTAATAAAGCAAA
Position: -170
Score: 2.9
Sequence: AAATAAGATGAATAAATT
Position: -136
Score: 4.7
Sequence: TTTTATTAAATATACAAT
Position: -130
Score: 3
Sequence: TAAATATACAATAAAATA
Position: -125
Score: 3.6
Sequence: ATACAATAAAATAGCATA
Position: -117
Score: 3.1
Sequence: AAATAGCATATATTCACT
Position: -115
Score: 3.2
Sequence: ATAGCATATATTCACTTT
Position: -94
Score: 3.4
Sequence: ACTGTATATAAACGAAAT
Position: -77
Score: 3
Sequence: TATTATTGCATATTTAAT
Position: -73
Score: 3.8
Sequence: ATTGCATATTTAATCAAA
Position: -56
Score: 3.2
Sequence: ACGGGGTTAATATATAAT
Position: -52
Score: 2.9
Sequence: GGTTAATATATAATCATC
Position: -48
Score: 3.9
Sequence: AATATATAATCATCAAAT
Position: -33
Score: 3.2
Sequence: AATAGCTAAAGAAAAAAT
Position: 12
Score: 3.1
Sequence: TTAGTATTAGCATACTCC
Locus tag: LEUM_1459
LEUM_1459 -189 3 ACAGTACAATTAATAAAG
-185 2.9 TACAATTAATAAAGCAAA
-170 2.9 AAATAAGATGAATAAATT
-136 4.7 TTTTATTAAATATACAAT
-130 3 TAAATATACAATAAAATA
-125 3.6 ATACAATAAAATAGCATA
-117 3.1 AAATAGCATATATTCACT
-115 3.2 ATAGCATATATTCACTTT
-94 3.4 ACTGTATATAAACGAAAT
-77 3 TATTATTGCATATTTAAT
-73 3.8 ATTGCATATTTAATCAAA
-56 3.2 ACGGGGTTAATATATAAT
-52 2.9 GGTTAATATATAATCATC
-48 3.9 AATATATAATCATCAAAT
-33 3.2 AATAGCTAAAGAAAAAAT
12 3.1 TTAGTATTAGCATACTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: Argininosuccinate synthase (EC 6.3.4.5)
Lactobacillus casei ATCC 334 LSEI_2811 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus fermentum IFO 3956 LAF_1625 -136 2.3 CTTGCATTTTTATTTGAT
Lactobacillus plantarum WCFS1 lp_0775 -139 4.1 TCTGCATAAAAATTCTAT
Lactobacillus reuteri JCM 1112 LAR_0702 -164 4.7 ATTAAATAATTATTCTAT
Lactobacillus rhamnosus GG LGG_02817 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0306 -47 3.5 AATGAATAGATTATGAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1459 -73 3.8 ATTGCATATTTAATCAAA
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