Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of MleR regulog to Lactobacillus rhamnosus HN001

Reference regulog properties
Source regulog: MleR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process: Malate utilization
Effector: L-malate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus rhamnosus HN001
Orthologous TF(s) LRH_01902
Regulated genes 2
Built upon 21 sites [see more]
Predicted regulatory interactions in Lactobacillus rhamnosus HN001
Locus tag Position Score Sequence
Position: -118
Score: 5.7
Sequence: TATAAAAATATTTTATC
Locus tag: LRH_01897
LRH_01897 -118 5.7 TATAAAAATATTTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mleS
Ortholog function: Malolactic enzyme
Lactobacillus acidophilus NCFM LBA1075 -363 4.7 TATTAATTTCATTTAAA
Lactobacillus brevis ATCC 367 LVIS_2203 -103 6 TATAAAATAATTTTATA
Lactobacillus casei ATCC 334 LSEI_0740 -389 5.7 TATAAAAATATTTTATC
Lactobacillus plantarum WCFS1 lp_1118 -138 5.4 TATTTAATATATTTATA
Lactobacillus reuteri JCM 1112 LAR_1441 -100 5.7 TATCAATTTTATTTATA
Lactobacillus rhamnosus GG LGG_00726 -118 5.7 TATAAAAATATTTTATC
Lactobacillus sakei subsp. sakei 23K LSA0441 -97 5.3 TATAAATCTATTTTATC
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1313 -107 5.7 TATAAATAATATTAATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1005 -106 6 TATAAAATAAATTTATA
Oenococcus oeni PSU-1 OEOE_1564 -83 5.1 TATAAGATAATTTTATC
Pediococcus pentosaceus ATCC 25745 PEPE_1617 -91 6 TATAAAAAATATTTATA
Position: -200
Score: 5.7
Sequence: GATAAAATATTTTTATA
Locus tag: LRH_01902
LRH_01902 -200 5.7 GATAAAATATTTTTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mleR
Ortholog function: Malate utilization transcrtional regulator MleR, LysR family
Lactobacillus brevis ATCC 367 LVIS_2204 -52 6 TATAAAATTATTTTATA
Lactobacillus casei ATCC 334 LSEI_0739 -76 5.7 GATAAAATATTTTTATA
Lactobacillus plantarum WCFS1 lp_1116 -53 5.4 TATAAATATATTAAATA
Lactobacillus reuteri JCM 1112 LAR_1442 -53 5.7 TATAAATAAAATTGATA
Lactobacillus rhamnosus GG LGG_00725 -322 5.7 GATAAAATATTTTTATA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1314 -51 5.7 TATTAATATTATTTATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1004 -53 6 TATAAATTTATTTTATA
Pediococcus pentosaceus ATCC 25745 PEPE_1618 -61 6 TATAAATATTTTTTATA