Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LJ1265 regulog to Lactobacillus acidophilus NCFM

Reference regulog properties
Source regulog: LJ1265 - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Pentose utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus acidophilus NCFM
Orthologous TF(s) LBA1488
Regulated genes 2
Built upon 4 sites [see more]
Predicted regulatory interactions in Lactobacillus acidophilus NCFM
Locus tag Position Score Sequence
Position: -103
Score: 6.4
Sequence: ACTTGTAATTGCTTACAAAA
Locus tag: LBA1488
LBA1488 -103 6.4 ACTTGTAATTGCTTACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: LJ1265
Ortholog function: Predicted pentose utilization transcriptional regulator, LacI family
Lactobacillus acidophilus NCFM LBA1488 -103 6.4 ACTTGTAATTGCTTACAAAA
Lactobacillus johnsonii NCC 533 LJ1265 -108 6.6 TCTTGTAAATGCTTACAAAA
Position: -46
Score: 6.4
Sequence: TTTTGTAAGCAATTACAAGT
Locus tag: LBA1489
LBA1489 -46 6.4 TTTTGTAAGCAATTACAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: LJ1266
Ortholog function: Transketolase, N-terminal section (EC 2.2.1.1)
Lactobacillus acidophilus NCFM LBA1489 -46 6.4 TTTTGTAAGCAATTACAAGT
Lactobacillus johnsonii NCC 533 LJ1266 -45 6.6 TTTTGTAAGCATTTACAAGA