Propagation of RbsR regulog to Lactobacillus plantarum JDM1
| Source regulog: | RbsR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Ribose utilization |
| Effector: | Ribose |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus plantarum JDM1 |
| Orthologous TF(s) | JDM1_2929 |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -74
Score: 6.2 Sequence: TTATTAAAACGTTTTCATAA
Position: -61
Score: 6.1 Sequence: TTCATAAAACGTTTTAATAA
Locus tag: JDM1_2928
|
||||
| JDM1_2928 | -74 | 6.2 | TTATTAAAACGTTTTCATAA | |
| -61 | 6.1 | TTCATAAAACGTTTTAATAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbsK | ||||
| Ortholog function: Ribokinase (EC 2.7.1.15) | ||||
| Lactobacillus plantarum WCFS1 | lp_3660 | -74 | 6.2 | TTATTAAAACGTTTTCATAA |
| -61 | 6.1 | TTCATAAAACGTTTTAATAA | ||
| Lactobacillus rhamnosus GG | LGG_00373 | -46 | 6.7 | TAAGTAAAACGTTTTACCTA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1699 | -67 | 5.6 | CTATTAAAACGTTTTCATAA |
| -54 | 5.3 | TTCATAAAACGTTTTAAACA | ||