Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YxeR regulog to Lactobacillus brevis ATCC 367

Reference regulog properties
Source regulog: YxeR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Antibiotic resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus brevis ATCC 367
Orthologous TF(s) LVIS_2199
Regulated genes 1
Built upon 20 sites [see more]
Predicted regulatory interactions in Lactobacillus brevis ATCC 367
Locus tag Position Score Sequence
Position: -90
Score: 4.3
Sequence: AAGTTGACACGGTGTCACTCA
Position: -46
Score: 5.1
Sequence: TAAGTGACGCCGTGTCACTTA
Locus tag: LVIS_2199
LVIS_2199 -90 4.3 AAGTTGACACGGTGTCACTCA
-46 5.1 TAAGTGACGCCGTGTCACTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yxeR
Ortholog function: Predicted antibiotic resistance transcriptional reguator, TetR family
Lactobacillus brevis ATCC 367 LVIS_2199 -90 4.3 AAGTTGACACGGTGTCACTCA
-46 5.1 TAAGTGACGCCGTGTCACTTA
Lactobacillus casei ATCC 334 LSEI_0394 -77 4.2 ATGTTGACACGGTGTCACTTT
-33 4.7 TTAGTGACACCGTGTCACCAC
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1914 -73 3.1 GTGTTGGAACGGTGTCACTTT
-29 3.5 AGGGTGACACGGTGTCACGGA
Lactobacillus fermentum IFO 3956 LAF_1826 -83 3.8 AAGTTGACACGGTGTCACCTC
-42 4.2 CGAGTGACACGGTGTCACTAT
Lactobacillus reuteri JCM 1112 LAR_1741 -83 4.5 TGATTGACATGGTGTCACTTT
-38 3.4 ACGGTGACACGGTGTCACGAT
Oenococcus oeni PSU-1 OEOE_0733 -72 3.6 AAATTGACGCCGTGTCACCAT
-35 4.9 TTAGTGACGTGGTGTCACTTA
Pediococcus pentosaceus ATCC 25745 PEPE_0017 -76 4.6 ATTTTGACACGGTGTCACTTT
-41 5.2 TTGTTGACACGGTGTCATTTT
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