Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GntR1 regulog to Lactobacillus brevis ATCC 367

Reference regulog properties
Source regulog: GntR1 - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode:
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus brevis ATCC 367
Orthologous TF(s) LVIS_1312, LVIS_1584
Regulated genes 4
Built upon 32 sites [see more]
Predicted regulatory interactions in Lactobacillus brevis ATCC 367
Locus tag Position Score Sequence
Position: -75
Score: 6.3
Sequence: TATGTAAATTTTTTTCATA
Locus tag: LVIS_0144
LVIS_0144 -75 6.3 TATGTAAATTTTTTTCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntZ
Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Lactobacillus brevis ATCC 367 LVIS_0144 -106 4.8 TTTGTAATTTTTTTACGGT
-75 6.3 TATGTAAATTTTTTTCATA
Lactobacillus casei ATCC 334 LSEI_0227 -146 4.7 CGTGAAAATAATTTACGGT
-113 5.7 TTTGTAAACGATTTACATA
Lactobacillus plantarum WCFS1 lp_1251 -109 6 AATGAAAATAATTTACAAA
-77 5.1 TATGTAAATAGTTTTATTA
Lactobacillus rhamnosus GG LGG_00274 -238 5.4 ATTGAAAATTATTTACGAA
-205 5.8 TTTGTAATTATTTTACATA
Lactobacillus sakei subsp. sakei 23K LSA0297 -96 5.2 TACGAAAATAATTTTCTAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0551 -97 5.1 TTAGAAAACAATTTTCAAT
-65 6.1 TGTGTAAATTATTTTCATA
Oenococcus oeni PSU-1 OEOE_1523 -78 5.6 TATGTAAATATTTTACACG
-46 5.4 TGAGTAAAAAAATTACATA
Pediococcus pentosaceus ATCC 25745 PEPE_1362 -98 5.3 TAAGAAAATAATTTTCTTG
-66 5.8 TATGTAACATATTTTCATA
Position: -99
Score: 5.7
Sequence: CTTGAAAATATTTTTCATA
Locus tag: LVIS_1576
LVIS_1576 -99 5.7 CTTGAAAATATTTTTCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntP
Ortholog function: H+/gluconate symporter related permease
Lactobacillus brevis ATCC 367 LVIS_1576 -131 4.6 TTTGAAAATAACATTCAAT
-99 5.7 CTTGAAAATATTTTTCATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0553 -97 5.1 TTAGAAAACAATTTTCAAT
-65 6.1 TGTGTAAATTATTTTCATA
Position: -95
Score: 5.2
Sequence: TATGTAAAAAAGTTTCACT
Position: -63
Score: 5.2
Sequence: GTTGTAAAATGTTTACAAA
Locus tag: LVIS_1584
LVIS_1584 -95 5.2 TATGTAAAAAAGTTTCACT
-63 5.2 GTTGTAAAATGTTTACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntR1
Ortholog function: Gluconate utilization transcriptional regulator GntR1, RpiR family
Lactobacillus brevis ATCC 367 LVIS_1584 -95 5.2 TATGTAAAAAAGTTTCACT
-63 5.2 GTTGTAAAATGTTTACAAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0550 -83 6.1 TATGAAAATAATTTACACA
-51 5.1 ATTGAAAATTGTTTTCTAA
Position: -175
Score: 5.2
Sequence: TTTGTAAACATTTTACAAC
Position: -143
Score: 5.2
Sequence: AGTGAAACTTTTTTACATA
Locus tag: LVIS_1585
LVIS_1585 -175 5.2 TTTGTAAACATTTTACAAC
-143 5.2 AGTGAAACTTTTTTACATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: Gluconokinase (EC 2.7.1.12)
Lactobacillus brevis ATCC 367 LVIS_1585 -175 5.2 TTTGTAAACATTTTACAAC
-143 5.2 AGTGAAACTTTTTTACATA
Lactobacillus casei ATCC 334 LSEI_0228 -146 4.7 CGTGAAAATAATTTACGGT
-113 5.7 TTTGTAAACGATTTACATA
Lactobacillus rhamnosus GG LGG_00275 -238 5.4 ATTGAAAATTATTTACGAA
-205 5.8 TTTGTAATTATTTTACATA
Lactobacillus sakei subsp. sakei 23K LSA0298 -96 5.2 TACGAAAATAATTTTCTAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0552 -97 5.1 TTAGAAAACAATTTTCAAT
-65 6.1 TGTGTAAATTATTTTCATA
Pediococcus pentosaceus ATCC 25745 PEPE_1361 -98 5.3 TAAGAAAATAATTTTCTTG
-66 5.8 TATGTAACATATTTTCATA
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