Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GalR regulog to Lactobacillus brevis ATCC 367

Reference regulog properties
Source regulog: GalR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galactosides utilization; Galactose utilization
Effector: Galactose
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus brevis ATCC 367
Orthologous TF(s) LVIS_1901
Regulated genes 3
Built upon 30 sites [see more]
Predicted regulatory interactions in Lactobacillus brevis ATCC 367
Locus tag Position Score Sequence
Position: -38
Score: 5.9
Sequence: AAAACTTTACTAAAAATTT
Locus tag: LVIS_1904
LVIS_1904 -38 5.9 AAAACTTTACTAAAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galK
Ortholog function: Galactokinase (EC 2.7.1.6)
Lactobacillus brevis ATCC 367 LVIS_1904 -38 5.9 AAAACTTTACTAAAAATTT
Lactobacillus plantarum WCFS1 lp_3482 -36 6 AAAATTTTAGTAAAACTAT
Lactobacillus reuteri JCM 1112 LAR_1662 -53 4.9 TTGTATTTAGTAAAAGTTT
Oenococcus oeni PSU-1 OEOE_0304 -231 5.5 AATATTTTAGTAAAGATTT
Pediococcus pentosaceus ATCC 25745 PEPE_0206 -193 5.2 AAAATTTAACCAAAATTAA
-33 6.3 AAAATTTTAGTAAAATTAT
Position: -222
Score: 5.1
Sequence: ATTGATTTACTAAATTTTT
Locus tag: LVIS_1906
LVIS_1906 -222 5.1 ATTGATTTACTAAATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: LVIS_1906
Ortholog function: Conserved hypothetical protein
Lactobacillus brevis ATCC 367 LVIS_1906 -222 5.1 ATTGATTTACTAAATTTTT
Lactobacillus sakei subsp. sakei 23K LSA0184 -111 5.5 AAAAGTTTAGTAAAATGAA
Oenococcus oeni PSU-1 OEOE_0306 -231 5.5 AATATTTTAGTAAAGATTT
Position: -84
Score: 5.3
Sequence: CGAATTTTAGTAAAAAATT
Locus tag: LVIS_1908
LVIS_1908 -84 5.3 CGAATTTTAGTAAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galM
Ortholog function: Aldose 1-epimerase (EC 5.1.3.3)
Lactobacillus brevis ATCC 367 LVIS_1908 -84 5.3 CGAATTTTAGTAAAAAATT
Oenococcus oeni PSU-1 OEOE_0301 -231 5.5 AATATTTTAGTAAAGATTT
Pediococcus pentosaceus ATCC 25745 PEPE_0202 -89 5.4 TTATTTTAACTAAAATATT
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