Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CopR regulog to Lactobacillus reuteri 100-23

Reference regulog properties
Source regulog: CopR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CopY
Regulation mode: repressor
Biological process: Copper homeostasis
Effector: Copper ion, (Cu2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus reuteri 100-23
Orthologous TF(s) Lreu23DRAFT_0095
Regulated genes 2
Built upon 34 sites [see more]
Predicted regulatory interactions in Lactobacillus reuteri 100-23
Locus tag Position Score Sequence
Position: -36
Score: 6.3
Sequence: ATGATTACAGTTGTAAACTA
Locus tag: Lreu23DRAFT_0846
Lreu23DRAFT_0846 -36 6.3 ATGATTACAGTTGTAAACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: copA2
Ortholog function: Copper-exporting ATPase (EC 3.6.3.4)
Lactobacillus acidophilus NCFM LBA1964 -32 6.1 ATAGTTACATTTGTAAACGA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0588 -72 4.8 TTGTCGACAAATGTAAACCA
-31 6 AAGGTTATAGATGTAAACGA
Lactobacillus fermentum IFO 3956 LAF_0138 -80 4.9 TCGTTGACAATTGTAAACGG
-35 5.7 AGATTTACAGTTGTAAACGA
Lactobacillus helveticus DPC 4571 lhv_2095 -59 5.3 AAGTTTACAAATGTAAAATT
-32 6.3 ATATTTACAAATGTAAACTA
Lactobacillus johnsonii NCC 533 LJ1836 -61 5.4 TTGTTGACAAGTGTAAACTA
-33 6.3 ATGATTACATTTGTAAACGA
Lactobacillus reuteri JCM 1112 LAR_0423 -70 4.6 TTGTTGACAACTGTAAACTT
-27 6.4 ATGATTACAATTGTAAACTA
Position: -32
Score: 5.6
Sequence: TAATTTACATATGTAAACGC
Locus tag: Lreu23DRAFT_0095
Lreu23DRAFT_0095 -32 5.6 TAATTTACATATGTAAACGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: copR
Ortholog function: Copper transport transcriptional regulator CopR, CopY family
Lactobacillus fermentum IFO 3956 LAF_1037 -42 4.6 ACGGGTACACTTGTAAACTG
Lactobacillus reuteri JCM 1112 LAR_0894 -32 5.1 GAATTTACATGTGTAAACGC
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