Propagation of ScrR regulog to Lactobacillus acidophilus NCFM
| Source regulog: | ScrR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sucrose utilization |
| Effector: | Sucrose-6-phosphate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus acidophilus NCFM |
| Orthologous TF(s) | LBA0399 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -168
Score: 6.4 Sequence: TATGTCAATCGTTTGACACA
Position: -80
Score: 6.2 Sequence: TATGATAAACGTTTGACACA
Locus tag: LBA0400
|
||||
| LBA0400 | -168 | 6.4 | TATGTCAATCGTTTGACACA | |
| -80 | 6.2 | TATGATAAACGTTTGACACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: scrB | ||||
| Ortholog function: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) | ||||
| Lactobacillus acidophilus NCFM | LBA0400 | -168 | 6.4 | TATGTCAATCGTTTGACACA |
| -80 | 6.2 | TATGATAAACGTTTGACACA | ||
| Lactobacillus fermentum IFO 3956 | LAF_1580 | -73 | 5.5 | TATGCTAATCGATTGACAGC |
| Lactobacillus johnsonii NCC 533 | LJ0518 | -164 | 5.9 | TATGTCAAGCGCTTATCATA |
| -87 | 5.3 | ACTGTTATTCGTTTGACATA | ||
| Lactobacillus plantarum WCFS1 | lp_0187 | -171 | 6 | TATGTCAAGCGTTTGATACA |
| -82 | 6.4 | AATGTCAAACGATTGACATA | ||
| Lactobacillus sakei subsp. sakei 23K | LSA1793 | -145 | 6.2 | TATGTCAAACGATTATCATA |
| -77 | 5.9 | AATGACATACGTTTGACATA | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0065 | -81 | 5.9 | TATGTTATACGATTGACAGT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0519 | -171 | 6 | TATGTCAAGCGTTTGATACA |
| -82 | 6.4 | AATGTCAAACGATTGACATA | ||
|
Position: -174
Score: 6.1 Sequence: TGTGTCAAACGTTTATCATA
Position: -86
Score: 6.5 Sequence: TGTGTCAAACGATTGACATA
Locus tag: LBA0401
|
||||
| LBA0401 | -174 | 6.1 | TGTGTCAAACGTTTATCATA | |
| -86 | 6.5 | TGTGTCAAACGATTGACATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: scrA | ||||
| Ortholog function: Sucrose-specific PTS system, EIIABC component (EC 2.7.1.69) | ||||
| Lactobacillus acidophilus NCFM | LBA0401 | -174 | 6.1 | TGTGTCAAACGTTTATCATA |
| -86 | 6.5 | TGTGTCAAACGATTGACATA | ||
| Lactobacillus fermentum IFO 3956 | LAF_1578 | -106 | 5.9 | TATGTCAAACGGTTGACAAT |
| Lactobacillus johnsonii NCC 533 | LJ0519 | -168 | 5.7 | TATGTCAAACGAATAACAGT |
| -91 | 6.1 | TATGATAAGCGCTTGACATA | ||
| Lactobacillus plantarum WCFS1 | lp_0185 | -193 | 6.5 | TATGTCAATCGTTTGACATT |
| -104 | 6.1 | TGTATCAAACGCTTGACATA | ||
| Lactobacillus sakei subsp. sakei 23K | LSA1792 | -169 | 6.1 | TATGTCAAACGTATGTCATT |
| -101 | 6.3 | TATGATAATCGTTTGACATA | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0066 | -107 | 6.2 | TGTGATAAACGATTGACATA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0518 | -193 | 6.5 | TATGTCAATCGTTTGACATT |
| -104 | 6.1 | TGTATCAAACGCTTGACATA | ||