Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Lp_3221 regulog to Lactobacillus paracasei subsp. paracasei 8700:2

Reference regulog properties
Source regulog: Lp_3221 - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus paracasei subsp. paracasei 8700:2
Orthologous TF(s) Lparp8_010100010020, Lparp8_010100012799
Regulated genes 2
Built upon 6 sites [see more]
Predicted regulatory interactions in Lactobacillus paracasei subsp. paracasei 8700:2
Locus tag Position Score Sequence
Position: -58
Score: 6.6
Sequence: ATATGGAATCGATACCATAT
Locus tag: Lparp8_010100010015
Lparp8_010100010015 -58 6.6 ATATGGAATCGATACCATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: agl4
Ortholog function: Oligo-1,6-glucosidase
Lactobacillus casei ATCC 334 LSEI_2102 -58 6.5 ATATGGAATCGATACCACAT
Lactobacillus plantarum WCFS1 lp_3220 -35 6.4 AAGTGGAATCGATTCCAAAT
Lactobacillus rhamnosus GG LGG_02105 -39 6.5 ATATGGAATCGATACCACAT
Position: -36
Score: 6.4
Sequence: CTATGAAATCGATTCCATAT
Locus tag: Lparp8_010100010020
Lparp8_010100010020 -36 6.4 CTATGAAATCGATTCCATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lp_3221
Ortholog function: Predicted sugar utilization transcriptional regulator, LacI family
Lactobacillus casei ATCC 334 LSEI_2103 -37 6.3 CTATGAAATCGATTCCATAC
Lactobacillus plantarum WCFS1 lp_3221 -36 6.2 TTATGGAAACGATTCCAAAC
Lactobacillus rhamnosus GG LGG_02106 -38 6.3 GTATGAAATCGATTCCATAA