Propagation of NagR regulog to Leuconostoc citreum KM20
| Source regulog: | NagR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine-6-phosphate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Leuconostoc citreum KM20 |
| Orthologous TF(s) | LCK_01386 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -46
Score: 4.9 Sequence: ATATTGGTATAGACCGAAGT
Position: -31
Score: 4.9 Sequence: GAAGTGGTATAGACCAATAG
Locus tag: LCK_00258
|
||||
| LCK_00258 | -46 | 4.9 | ATATTGGTATAGACCGAAGT | |
| -31 | 4.9 | GAAGTGGTATAGACCAATAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagB | ||||
| Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) | ||||
| Lactobacillus acidophilus NCFM | LBA1948 | -57 | 5.7 | AAAATGGTCTATTCCATTTT |
| -37 | 5 | ATAATGGACTAGACCATTAA | ||
| Lactobacillus casei ATCC 334 | LSEI_2889 | -77 | 4.5 | ATTACGGTATAGACCACTAT |
| -34 | 4.7 | ACATTGGACTAGACCAGATA | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_2010 | -53 | 5.6 | AAAATGGACTATACCAATAT |
| Lactobacillus helveticus DPC 4571 | lhv_2077 | -54 | 5.7 | AAAATGGTCTATTCCATTTT |
| -34 | 4.6 | ATAATGGACTAGACCAGTAA | ||
| Lactobacillus rhamnosus GG | LGG_02913 | -78 | 5.2 | AATTAGGTATAGACCATTGT |
| -35 | 4.9 | ATATTGGACTAGACCAGATA | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1465 | -92 | 5.1 | TAAATGGTATAGACCATGAA |
| -39 | 5.4 | TAATTGGTATAGACCAAAAC | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0354 | -50 | 5.1 | ATATTGGTATAGACCAAAAC |
| -35 | 5.8 | AAAACGGTATAGACCAATTT | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_0335 | -60 | 5.1 | ATTTTGGTTTAGACCATTTT |
| -39 | 5.5 | TAATTGGACTATACCAAAAA | ||
|
Position: -122
Score: 5.9 Sequence: TAATCGGTCTATACCAATTA
Locus tag: LCK_01387
|
||||
| LCK_01387 | -122 | 5.9 | TAATCGGTCTATACCAATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagA | ||||
| Ortholog function: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0539 | -66 | 4.8 | TTTCTGGTCTATACCGATTA |
| Lactobacillus casei ATCC 334 | LSEI_1808 | -73 | 4.8 | ATCTTGGTCTATACCAGTTA |
| Lactobacillus plantarum WCFS1 | lp_0562 | -55 | 5.2 | AGTTTGGTCTATACCGATTA |
| Lactobacillus sakei subsp. sakei 23K | LSA1588 | -56 | 5.6 | TTTTTGGTCTATACCATTTA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1466 | -146 | 5.4 | GTTTTGGTCTATACCAATTA |
| -93 | 5.1 | TTCATGGTCTATACCATTTA | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0425 | -82 | 5.9 | TAATAGGTCTAGACCAATTA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1528 | -57 | 5.1 | TTTTTGGTCTATACCGATAT |