Propagation of CtsR regulog to Lactobacillus rhamnosus HN001
| Source regulog: | CtsR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CtsR |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus rhamnosus HN001 |
| Orthologous TF(s) | LRH_03075 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -88
Score: 7 Sequence: AAATCTTTGACCTTATTTGACTTT
Locus tag: LRH_05279
|
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| LRH_05279 | -88 | 7 | AAATCTTTGACCTTATTTGACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: clpP | ||||
| Ortholog function: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0654 | -90 | 6.2 | TTTTGTTTGACCTACTCTGACCTT |
| Lactobacillus casei ATCC 334 | LSEI_0963 | -85 | 7 | AAATCTTTGACCTTATTTGACTTT |
| Lactobacillus fermentum IFO 3956 | LAF_0360 | -90 | 6.6 | AATGATTTGACCTTTTTTGACCTA |
| Lactobacillus plantarum WCFS1 | lp_0786 | -92 | 5.8 | TTTCTTTTGACCTTCACTGACCTT |
| Lactobacillus reuteri JCM 1112 | LAR_0379 | -93 | 6.7 | AAACATTTGACCTTTTTTGACCAA |
| Lactobacillus rhamnosus GG | LGG_00931 | -88 | 7 | AAATCTTTGACCTTATTTGACTTT |
| Lactobacillus sakei subsp. sakei 23K | LSA0531 | -116 | 6 | TACCATTTGACCATAGTTGACCTT |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1168 | -101 | 6.3 | TTAAATTTGACCATTATTGACCTT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0455 | -95 | 6.9 | AAATATTTGACCTTTTTTGACCAA |
|
Position: -73
Score: 6.2 Sequence: AATAGTTTGACCTTAACTGACCAA
Locus tag: LRH_04168
|
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| LRH_04168 | -73 | 6.2 | AATAGTTTGACCTTAACTGACCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: clpB | ||||
| Ortholog function: ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0762 | -139 | -1.6 | TTGGTCAAAAAAGGTCAAATTATT |
| Lactobacillus plantarum WCFS1 | lp_1903 | -118 | 6.5 | AAATCCTTGACCTTGTTTGACCTT |
| Lactobacillus rhamnosus GG | LGG_01367 | -73 | 6.2 | AATAGTTTGACCTTAACTGACCAA |
| Lactobacillus sakei subsp. sakei 23K | LSA1040 | -89 | 6.5 | GAATGTTTGACCTATTTTGACTAT |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0863 | -75 | -1 | AAGGTCAAACTTAGTCAAAGTTTA |