Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LSEI_0368 regulog to Lactobacillus rhamnosus GG

Reference regulog properties
Source regulog: LSEI_0368 - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus rhamnosus GG
Orthologous TF(s) LGG_00419
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Lactobacillus rhamnosus GG
Locus tag Position Score Sequence
Position: -43
Score: 6.7
Sequence: TTGCGTAAACGTTACCGCAA
Locus tag: LGG_00418
LGG_00418 -43 6.7 TTGCGTAAACGTTACCGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tal
Ortholog function: Transaldolase (EC 2.2.1.2)
Lactobacillus casei ATCC 334 LSEI_0367 -142 6.5 ATGCGAAAACGTTTACACAA
-44 6.7 TTGCGTAAACGTTACCGCAA
Lactobacillus rhamnosus GG LGG_00418 -141 6.5 GTGCGAAAACGTTTACACAA
-43 6.7 TTGCGTAAACGTTACCGCAA
Position: -180
Score: 6.7
Sequence: TTGCGGTAACGTTTACGCAA
Locus tag: LGG_00419
LGG_00419 -180 6.7 TTGCGGTAACGTTTACGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: LSEI_0368
Ortholog function: Predicted sugar utilization transcriptional regulator, LacI family
Lactobacillus casei ATCC 334 LSEI_0368 -169 6.7 TTGCGGTAACGTTTACGCAA
-71 6.5 TTGTGTAAACGTTTTCGCAT
Lactobacillus rhamnosus GG LGG_00419 -180 6.7 TTGCGGTAACGTTTACGCAA
-82 6.5 TTGTGTAAACGTTTTCGCAC
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