Propagation of TreR regulog to Lactobacillus plantarum WCFS1
| Source regulog: | TreR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Trehalose utilization |
| Effector: | Trehalose-6-phosphate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus plantarum WCFS1 |
| Orthologous TF(s) | lp_2924, lp_0262 |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -59
Score: 5.6 Sequence: CAACTTGTCTAAACAAGTCT
Locus tag: lp_0262
|
||||
| lp_0262 | -59 | 5.6 | CAACTTGTCTAAACAAGTCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treR | ||||
| Ortholog function: Trehalose utilization transcriptional regulator TreR, GntR family | ||||
| Lactobacillus acidophilus NCFM | LBA1013 | -134 | 6.6 | AAACTTGTATATACAAGTTG |
| -56 | 5.2 | TTACTTGTCTATACATTTAT | ||
| Lactobacillus casei ATCC 334 | LSEI_0629 | -61 | 5.2 | ATACCTGTACGTACAGGTAA |
| Lactobacillus johnsonii NCC 533 | LJ0759 | 39 | 5.9 | ATACTTGTCTGTACAAGTTG |
| Lactobacillus plantarum WCFS1 | lp_0262 | -59 | 5.6 | CAACTTGTCTAAACAAGTCT |
| Lactobacillus rhamnosus GG | LGG_00601 | -61 | 5.6 | ATACCTGTACGTACAAGTAG |
| Lactobacillus sakei subsp. sakei 23K | LSA1201 | -113 | 6.1 | CAACATGTATAGACAAGTTG |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1513 | -162 | 6.3 | TCACTTGTATATACAAGTTG |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1805 | -142 | 6.2 | AAACTTGTATATACAAGATG |
| -66 | 5.7 | TACCTTGTATATACTAGTTA | ||