Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YxeR regulog to Leuconostoc citreum KM20

Reference regulog properties
Source regulog: YxeR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Antibiotic resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Leuconostoc citreum KM20
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 20 sites [see more]
Predicted regulatory interactions in Leuconostoc citreum KM20
Locus tag Position Score Sequence
Position: 13
Score: 3.4
Sequence: TTAATGAAATGTTAAAAGAAA
Position: 25
Score: 4.1
Sequence: TAAAAGAAAAGGTGAGATATA
Locus tag: LCK_00924
LCK_00924 13 3.4 TTAATGAAATGTTAAAAGAAA
25 4.1 TAAAAGAAAAGGTGAGATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yxeA
Ortholog function: Predicted antimicrobial peptide transporter, permease protein
Lactobacillus acidophilus NCFM LBA1839 -81 3.6 TTATTGACAACTCGTCACAAT
Lactobacillus brevis ATCC 367 LVIS_2198 -90 4.3 AAGTTGACACGGTGTCACTCA
-46 5.1 TAAGTGACGCCGTGTCACTTA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1913 -73 3.1 GTGTTGGAACGGTGTCACTTT
-29 3.5 AGGGTGACACGGTGTCACGGA
Lactobacillus fermentum IFO 3956 LAF_1825 -83 3.8 AAGTTGACACGGTGTCACCTC
-42 4.2 CGAGTGACACGGTGTCACTAT
Lactobacillus helveticus DPC 4571 lhv_1879 -80 4.5 GTATTGACAATGCGTCACAAA
Lactobacillus johnsonii NCC 533 LJ0540 -75 4.2 ATGTTGACACGGTGTCACTTT
-31 5 AAAGTGACACAGTGTCACAAG
Lactobacillus reuteri JCM 1112 LAR_1740 -83 4.5 TGATTGACATGGTGTCACTTT
-38 3.4 ACGGTGACACGGTGTCACGAT
Lactobacillus rhamnosus GG LGG_00489 -122 4.2 AAGTTGACACCGTGTCACTAT
-78 3.4 ACGGTGACACGGTGTCACCAT
Oenococcus oeni PSU-1 OEOE_0734 -72 3.6 AAATTGACGCCGTGTCACCAT
-35 4.9 TTAGTGACGTGGTGTCACTTA
Pediococcus pentosaceus ATCC 25745 PEPE_0018 -76 4.6 ATTTTGACACGGTGTCACTTT
-41 5.2 TTGTTGACACGGTGTCATTTT
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