Collection of regulogs in Corynebacteriaceae taxonomic group
Genomes | 8 |
TF regulogs | 59 |
TF regulons | 262 |
TF binding sites | 1647 |
RNA regulogs | 13 |
RNA regulons | 56 |
RNA sites | 80 |
This collection involves all regulons that were tentatively predicted by applying integrative comparative genomic approach to a single taxonomic group of closely-related genomes. To infer the regulons operated by transcription factors (TFs), we combined the identification of TF binding sites and cross-genome comparison of regulons with the analysis of the genomic and functional context of candidate target genes. To infer the regulons operated by regulatory RNAs such as riboswitches, we identified candidate RNA regulatory elements using HMM profiles and further analyzed their genomic and functional context.
TF | RNA | Total | ||||
---|---|---|---|---|---|---|
Genomes | Regulons | Sites | Regulons | Sites | Regulons | Sites |
Corynebacterium amycolatum SK46 | 25 | 138 | 8 | 10 | 33 | 148 |
Corynebacterium aurimucosum ATCC 700975 | 34 | 175 | 5 | 6 | 39 | 181 |
Corynebacterium diphtheriae NCTC 13129 | 28 | 172 | 8 | 11 | 36 | 183 |
Corynebacterium efficiens YS-314 | 48 | 284 | 8 | 12 | 56 | 296 |
Corynebacterium glutamicum ATCC 13032 | 57 | 438 | 9 | 16 | 66 | 454 |
Corynebacterium jeikeium K411 | 25 | 163 | 5 | 6 | 30 | 169 |
Corynebacterium kroppenstedtii DSM 44385 | 21 | 124 | 8 | 12 | 29 | 136 |
Corynebacterium urealyticum DSM 7109 | 24 | 153 | 5 | 7 | 29 | 160 |
Family | Type | Regulator | Function | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
ArgR | TF | ArgR |
2
ArgR
Corynebacterium glutamicum ATCC 13032 |
2
ArgR
Corynebacterium efficiens YS-314 |
1
ArgR
Corynebacterium diphtheriae NCTC 13129 |
1
ArgR
Corynebacterium aurimucosum ATCC 700975 |
1
ArgR
Corynebacterium jeikeium K411 |
1
ArgR
Corynebacterium urealyticum DSM 7109 |
1
ArgR
Corynebacterium amycolatum SK46 |
1
ArgR
Corynebacterium kroppenstedtii DSM 44385 |
Arginine biosynthesis |
ArsR | TF | ArsR |
4
ArsR
Corynebacterium glutamicum ATCC 13032 |
2
ArsR
Corynebacterium efficiens YS-314 |
2
ArsR
Corynebacterium aurimucosum ATCC 700975 |
2
ArsR
Corynebacterium jeikeium K411 |
2
ArsR
Corynebacterium urealyticum DSM 7109 |
Arsenic resistance | |||
TF | CadR |
1
CadR
Corynebacterium glutamicum ATCC 13032 |
1
CadR
Corynebacterium efficiens YS-314 |
1
CadR
Corynebacterium aurimucosum ATCC 700975 |
1
CadR
Corynebacterium jeikeium K411 |
1
CadR
Corynebacterium urealyticum DSM 7109 |
1
CadR
Corynebacterium amycolatum SK46 |
1
CadR
Corynebacterium kroppenstedtii DSM 44385 |
Cadmium resistance | ||
TF | Cg1831 |
2
Cg1831
Corynebacterium glutamicum ATCC 13032 |
2
Cg1831
Corynebacterium efficiens YS-314 |
Iron homeostasis | |||||||
TF | SufR |
1
SufR
Corynebacterium glutamicum ATCC 13032 |
1
SufR
Corynebacterium efficiens YS-314 |
1
SufR
Corynebacterium diphtheriae NCTC 13129 |
1
SufR
Corynebacterium aurimucosum ATCC 700975 |
1
SufR
Corynebacterium jeikeium K411 |
1
SufR
Corynebacterium urealyticum DSM 7109 |
1
SufR
Corynebacterium amycolatum SK46 |
1
SufR
Corynebacterium kroppenstedtii DSM 44385 |
Iron-sulfur cluster biogenesis | |
TF | SutR |
1
SutR
Corynebacterium glutamicum ATCC 13032 |
1
SutR
Corynebacterium efficiens YS-314 |
Sulfur metabolism | |||||||
TF | Znr |
1
Znr
Corynebacterium glutamicum ATCC 13032 |
1
Znr
Corynebacterium efficiens YS-314 |
1
Znr
Corynebacterium diphtheriae NCTC 13129 |
1
Znr
Corynebacterium aurimucosum ATCC 700975 |
Zinc homeostasis | |||||
CRP | TF | GlxR |
114
GlxR
Corynebacterium glutamicum ATCC 13032 |
77
GlxR
Corynebacterium efficiens YS-314 |
44
GlxR
Corynebacterium diphtheriae NCTC 13129 |
52
GlxR
Corynebacterium aurimucosum ATCC 700975 |
47
GlxR
Corynebacterium jeikeium K411 |
49
GlxR
Corynebacterium urealyticum DSM 7109 |
38
GlxR
Corynebacterium amycolatum SK46 |
47
GlxR
Corynebacterium kroppenstedtii DSM 44385 |
Energy metabolism; Carbohydrate metabolism |
CitB | TF | CitB |
3
CitB
Corynebacterium glutamicum ATCC 13032 |
2
CitB
Corynebacterium efficiens YS-314 |
Citrate utilization | ||||||
CsoR | TF | CsoR |
2
CsoR
Corynebacterium glutamicum ATCC 13032 |
1
CsoR
Corynebacterium efficiens YS-314 |
1
CsoR
Corynebacterium aurimucosum ATCC 700975 |
2
CsoR
Corynebacterium jeikeium K411 |
1
CsoR
Corynebacterium amycolatum SK46 |
2
CsoR
Corynebacterium kroppenstedtii DSM 44385 |
Copper resistance | ||
DeoR | TF | FruR |
2
FruR
Corynebacterium glutamicum ATCC 13032 |
2
FruR
Corynebacterium efficiens YS-314 |
Fructose utilization | ||||||
DtxR | TF | DtxR |
36
DtxR
Corynebacterium glutamicum ATCC 13032 |
9
DtxR
Corynebacterium efficiens YS-314 |
26
DtxR
Corynebacterium diphtheriae NCTC 13129 |
13
DtxR
Corynebacterium aurimucosum ATCC 700975 |
14
DtxR
Corynebacterium jeikeium K411 |
11
DtxR
Corynebacterium urealyticum DSM 7109 |
8
DtxR
Corynebacterium amycolatum SK46 |
5
DtxR
Corynebacterium kroppenstedtii DSM 44385 |
Iron homeostasis |
TF | MntR |
1
MntR
Corynebacterium glutamicum ATCC 13032 |
1
MntR
Corynebacterium efficiens YS-314 |
2
MntR
Corynebacterium diphtheriae NCTC 13129 |
2
MntR
Corynebacterium aurimucosum ATCC 700975 |
3
MntR
Corynebacterium jeikeium K411 |
1
MntR
Corynebacterium urealyticum DSM 7109 |
1
MntR
Corynebacterium amycolatum SK46 |
3
MntR
Corynebacterium kroppenstedtii DSM 44385 |
Manganese homeostasis | |
FUR | TF | Zur |
7
Zur
Corynebacterium glutamicum ATCC 13032 |
1
Zur
Corynebacterium efficiens YS-314 |
6
Zur
Corynebacterium diphtheriae NCTC 13129 |
4
Zur
Corynebacterium aurimucosum ATCC 700975 |
3
Zur
Corynebacterium jeikeium K411 |
4
Zur
Corynebacterium urealyticum DSM 7109 |
3
Zur
Corynebacterium amycolatum SK46 |
2
Zur
Corynebacterium kroppenstedtii DSM 44385 |
Zinc homeostasis |
GntR/MocR | TF | PdxR |
1
PdxR
Corynebacterium glutamicum ATCC 13032 |
1
PdxR
Corynebacterium diphtheriae NCTC 13129 |
1
PdxR
Corynebacterium aurimucosum ATCC 700975 |
Pyridoxine biosynthesis | |||||
GntR/Others | TF | Cg1143 |
3
Cg1143
Corynebacterium glutamicum ATCC 13032 |
2
Cg1143
Corynebacterium efficiens YS-314 |
2
Cg1143
Corynebacterium aurimucosum ATCC 700975 |
2
Cg1143
Corynebacterium jeikeium K411 |
2
Cg1143
Corynebacterium urealyticum DSM 7109 |
2
Cg1143
Corynebacterium amycolatum SK46 |
|||
TF | Cg2544 |
2
Cg2544
Corynebacterium glutamicum ATCC 13032 |
2
Cg2544
Corynebacterium efficiens YS-314 |
||||||||
TF | Cg3261 |
1
Cg3261
Corynebacterium glutamicum ATCC 13032 |
1
Cg3261
Corynebacterium efficiens YS-314 |
1
Cg3261
Corynebacterium diphtheriae NCTC 13129 |
1
Cg3261
Corynebacterium aurimucosum ATCC 700975 |
1
Cg3261
Corynebacterium jeikeium K411 |
2
Cg3261
Corynebacterium urealyticum DSM 7109 |
1
Cg3261
Corynebacterium amycolatum SK46 |
Multidrug resistance; Multidrug efflux | ||
TF | GntR |
7
GntR
Corynebacterium glutamicum ATCC 13032 |
5
GntR
Corynebacterium efficiens YS-314 |
1
GntR
Corynebacterium aurimucosum ATCC 700975 |
Gluconate utilization | ||||||
TF | IolR |
6
IolR
Corynebacterium glutamicum ATCC 13032 |
Inositol utilization | ||||||||
TF | LldR |
4
LldR
Corynebacterium glutamicum ATCC 13032 |
3
LldR
Corynebacterium efficiens YS-314 |
3
LldR
Corynebacterium diphtheriae NCTC 13129 |
Lactate utilization | ||||||
TF | NanR |
3
NanR
Corynebacterium glutamicum ATCC 13032 |
4
NanR
Corynebacterium diphtheriae NCTC 13129 |
2
NanR
Corynebacterium aurimucosum ATCC 700975 |
4
NanR
Corynebacterium kroppenstedtii DSM 44385 |
Sialic acid utilization | |||||
HrcA | TF | HrcA |
2
HrcA
Corynebacterium glutamicum ATCC 13032 |
2
HrcA
Corynebacterium efficiens YS-314 |
2
HrcA
Corynebacterium diphtheriae NCTC 13129 |
2
HrcA
Corynebacterium aurimucosum ATCC 700975 |
2
HrcA
Corynebacterium jeikeium K411 |
2
HrcA
Corynebacterium urealyticum DSM 7109 |
2
HrcA
Corynebacterium amycolatum SK46 |
2
HrcA
Corynebacterium kroppenstedtii DSM 44385 |
Heat shock response |
HxlR | TF | QorR |
2
QorR
Corynebacterium glutamicum ATCC 13032 |
Energy metabolism | |||||||
IclR | TF | Cg0646 |
1
Cg0646
Corynebacterium glutamicum ATCC 13032 |
1
Cg0646
Corynebacterium efficiens YS-314 |
|||||||
TF | GenR |
3
GenR
Corynebacterium glutamicum ATCC 13032 |
3
GenR
Corynebacterium efficiens YS-314 |
3-hydroxybenzoate degradation | |||||||
TF | LtbR |
5
LtbR
Corynebacterium glutamicum ATCC 13032 |
5
LtbR
Corynebacterium efficiens YS-314 |
5
LtbR
Corynebacterium diphtheriae NCTC 13129 |
5
LtbR
Corynebacterium aurimucosum ATCC 700975 |
4
LtbR
Corynebacterium jeikeium K411 |
4
LtbR
Corynebacterium urealyticum DSM 7109 |
2
LtbR
Corynebacterium amycolatum SK46 |
3
LtbR
Corynebacterium kroppenstedtii DSM 44385 |
Tryptophan biosynthesis; Leucine biosynthesis | |
TF | PcaR |
4
PcaR
Corynebacterium glutamicum ATCC 13032 |
4
PcaR
Corynebacterium efficiens YS-314 |
Protocatechuate degradation | |||||||
LacI | TF | Cg2314 |
2
Cg2314
Corynebacterium glutamicum ATCC 13032 |
Sugar utilization | |||||||
TF | IolR2 |
2
IolR2
Corynebacterium glutamicum ATCC 13032 |
Inositol utilization | ||||||||
TF | RbsR |
3
RbsR
Corynebacterium glutamicum ATCC 13032 |
2
RbsR
Corynebacterium efficiens YS-314 |
1
RbsR
Corynebacterium diphtheriae NCTC 13129 |
Ribose utilization | ||||||
TF | UriR |
2
UriR
Corynebacterium glutamicum ATCC 13032 |
1
UriR
Corynebacterium efficiens YS-314 |
Pyrimidine utilization; Uridine utilization | |||||||
LexA | TF | LexA |
30
LexA
Corynebacterium glutamicum ATCC 13032 |
16
LexA
Corynebacterium efficiens YS-314 |
9
LexA
Corynebacterium diphtheriae NCTC 13129 |
8
LexA
Corynebacterium aurimucosum ATCC 700975 |
8
LexA
Corynebacterium jeikeium K411 |
7
LexA
Corynebacterium urealyticum DSM 7109 |
11
LexA
Corynebacterium amycolatum SK46 |
7
LexA
Corynebacterium kroppenstedtii DSM 44385 |
SOS response |
LuxR | TF | BenR |
3
BenR
Corynebacterium glutamicum ATCC 13032 |
3
BenR
Corynebacterium efficiens YS-314 |
Benzoate degradation | ||||||
TF | PcaO |
1
PcaO
Corynebacterium glutamicum ATCC 13032 |
1
PcaO
Corynebacterium efficiens YS-314 |
Protocatechuate degradation | |||||||
LysR | TF | Cg3239 |
2
Cg3239
Corynebacterium glutamicum ATCC 13032 |
2
Cg3239
Corynebacterium efficiens YS-314 |
2
Cg3239
Corynebacterium aurimucosum ATCC 700975 |
2
Cg3239
Corynebacterium jeikeium K411 |
Metabolite transport | ||||
TF | LysG |
2
LysG
Corynebacterium glutamicum ATCC 13032 |
2
LysG
Corynebacterium efficiens YS-314 |
2
LysG
Corynebacterium diphtheriae NCTC 13129 |
2
LysG
Corynebacterium aurimucosum ATCC 700975 |
Amino acid efflux | |||||
TF | QsuR |
2
QsuR
Corynebacterium glutamicum ATCC 13032 |
2
QsuR
Corynebacterium efficiens YS-314 |
Aromatic amino acid metabolism | |||||||
MarR | TF | Cg1211 |
2
Cg1211
Corynebacterium glutamicum ATCC 13032 |
2
Cg1211
Corynebacterium efficiens YS-314 |
2
Cg1211
Corynebacterium amycolatum SK46 |
Metabolite transport | |||||
TF | RosR |
10
RosR
Corynebacterium glutamicum ATCC 13032 |
8
RosR
Corynebacterium efficiens YS-314 |
4
RosR
Corynebacterium diphtheriae NCTC 13129 |
5
RosR
Corynebacterium aurimucosum ATCC 700975 |
3
RosR
Corynebacterium jeikeium K411 |
4
RosR
Corynebacterium urealyticum DSM 7109 |
3
RosR
Corynebacterium amycolatum SK46 |
4
RosR
Corynebacterium kroppenstedtii DSM 44385 |
Peroxide stress response | |
MerR | TF | HspR |
2
HspR
Corynebacterium glutamicum ATCC 13032 |
2
HspR
Corynebacterium efficiens YS-314 |
3
HspR
Corynebacterium diphtheriae NCTC 13129 |
2
HspR
Corynebacterium aurimucosum ATCC 700975 |
3
HspR
Corynebacterium jeikeium K411 |
2
HspR
Corynebacterium urealyticum DSM 7109 |
2
HspR
Corynebacterium amycolatum SK46 |
2
HspR
Corynebacterium kroppenstedtii DSM 44385 |
Heat shock response |
NrdR | TF | NrdR |
1
NrdR
Corynebacterium glutamicum ATCC 13032 |
2
NrdR
Corynebacterium efficiens YS-314 |
2
NrdR
Corynebacterium diphtheriae NCTC 13129 |
1
NrdR
Corynebacterium aurimucosum ATCC 700975 |
1
NrdR
Corynebacterium jeikeium K411 |
2
NrdR
Corynebacterium urealyticum DSM 7109 |
1
NrdR
Corynebacterium amycolatum SK46 |
1
NrdR
Corynebacterium kroppenstedtii DSM 44385 |
Deoxyribonucleotide biosynthesis |
NrtR | TF | NrtR |
1
NrtR
Corynebacterium glutamicum ATCC 13032 |
1
NrtR
Corynebacterium efficiens YS-314 |
1
NrtR
Corynebacterium diphtheriae NCTC 13129 |
1
NrtR
Corynebacterium urealyticum DSM 7109 |
NAD biosynthesis | ||||
PadR | TF | Cg0979 |
1
Cg0979
Corynebacterium glutamicum ATCC 13032 |
1
Cg0979
Corynebacterium efficiens YS-314 |
1
Cg0979
Corynebacterium aurimucosum ATCC 700975 |
Lipoprotein export | |||||
TF | VanR |
2
VanR
Corynebacterium glutamicum ATCC 13032 |
2
VanR
Corynebacterium efficiens YS-314 |
Vanillate utilization | |||||||
ROK | TF | SsuR |
4
SsuR
Corynebacterium glutamicum ATCC 13032 |
2
SsuR
Corynebacterium amycolatum SK46 |
Sulfur metabolism | ||||||
RpiR | TF | PctR |
1
PctR
Corynebacterium glutamicum ATCC 13032 |
Phosphonate utilization | |||||||
TetR | TF | AcnR |
1
AcnR
Corynebacterium glutamicum ATCC 13032 |
1
AcnR
Corynebacterium efficiens YS-314 |
1
AcnR
Corynebacterium diphtheriae NCTC 13129 |
1
AcnR
Corynebacterium aurimucosum ATCC 700975 |
1
AcnR
Corynebacterium jeikeium K411 |
1
AcnR
Corynebacterium urealyticum DSM 7109 |
1
AcnR
Corynebacterium amycolatum SK46 |
1
AcnR
Corynebacterium kroppenstedtii DSM 44385 |
Tricarboxylic acid cycle |
TF | AmtR |
14
AmtR
Corynebacterium glutamicum ATCC 13032 |
12
AmtR
Corynebacterium efficiens YS-314 |
3
AmtR
Corynebacterium diphtheriae NCTC 13129 |
1
AmtR
Corynebacterium aurimucosum ATCC 700975 |
Nitrogen metabolism | |||||
TF | BioQ |
3
BioQ
Corynebacterium glutamicum ATCC 13032 |
3
BioQ
Corynebacterium efficiens YS-314 |
4
BioQ
Corynebacterium diphtheriae NCTC 13129 |
2
BioQ
Corynebacterium aurimucosum ATCC 700975 |
2
BioQ
Corynebacterium jeikeium K411 |
3
BioQ
Corynebacterium amycolatum SK46 |
2
BioQ
Corynebacterium kroppenstedtii DSM 44385 |
Biotin biosynthesis | ||
TF | Cg0454 |
1
Cg0454
Corynebacterium glutamicum ATCC 13032 |
1
Cg0454
Corynebacterium efficiens YS-314 |
1
Cg0454
Corynebacterium diphtheriae NCTC 13129 |
1
Cg0454
Corynebacterium aurimucosum ATCC 700975 |
1
Cg0454
Corynebacterium jeikeium K411 |
1
Cg0454
Corynebacterium urealyticum DSM 7109 |
1
Cg0454
Corynebacterium amycolatum SK46 |
1
Cg0454
Corynebacterium kroppenstedtii DSM 44385 |
Multidrug resistance | |
TF | Cg1053 |
1
Cg1053
Corynebacterium glutamicum ATCC 13032 |
1
Cg1053
Corynebacterium efficiens YS-314 |
1
Cg1053
Corynebacterium jeikeium K411 |
1
Cg1053
Corynebacterium urealyticum DSM 7109 |
1
Cg1053
Corynebacterium kroppenstedtii DSM 44385 |
Multidrug resistance | ||||
TF | FasR |
4
FasR
Corynebacterium glutamicum ATCC 13032 |
2
FasR
Corynebacterium efficiens YS-314 |
2
FasR
Corynebacterium diphtheriae NCTC 13129 |
2
FasR
Corynebacterium aurimucosum ATCC 700975 |
2
FasR
Corynebacterium amycolatum SK46 |
Fatty acid biosynthesis | ||||
TF | Jk1423 |
1
Jk1423
Corynebacterium aurimucosum ATCC 700975 |
1
Jk1423
Corynebacterium jeikeium K411 |
1
Jk1423
Corynebacterium urealyticum DSM 7109 |
|||||||
TF | McbR |
25
McbR
Corynebacterium glutamicum ATCC 13032 |
16
McbR
Corynebacterium efficiens YS-314 |
9
McbR
Corynebacterium diphtheriae NCTC 13129 |
15
McbR
Corynebacterium aurimucosum ATCC 700975 |
14
McbR
Corynebacterium jeikeium K411 |
13
McbR
Corynebacterium urealyticum DSM 7109 |
13
McbR
Corynebacterium amycolatum SK46 |
10
McbR
Corynebacterium kroppenstedtii DSM 44385 |
Methionine biosynthesis | |
TF | PaaR |
7
PaaR
Corynebacterium efficiens YS-314 |
Phenylacetic acid degradation | ||||||||
TF | QacR |
1
QacR
Corynebacterium glutamicum ATCC 13032 |
1
QacR
Corynebacterium diphtheriae NCTC 13129 |
1
QacR
Corynebacterium aurimucosum ATCC 700975 |
1
QacR
Corynebacterium urealyticum DSM 7109 |
1
QacR
Corynebacterium amycolatum SK46 |
Drug resistance | ||||
XRE | TF | ClgR |
7
ClgR
Corynebacterium glutamicum ATCC 13032 |
6
ClgR
Corynebacterium efficiens YS-314 |
6
ClgR
Corynebacterium diphtheriae NCTC 13129 |
5
ClgR
Corynebacterium aurimucosum ATCC 700975 |
5
ClgR
Corynebacterium jeikeium K411 |
4
ClgR
Corynebacterium urealyticum DSM 7109 |
4
ClgR
Corynebacterium amycolatum SK46 |
2
ClgR
Corynebacterium kroppenstedtii DSM 44385 |
Proteolysis |
[Other] | TF | GabR |
2
GabR
Corynebacterium glutamicum ATCC 13032 |
5
GabR
Corynebacterium aurimucosum ATCC 700975 |
Gamma-aminobutyrate utilization | ||||||
RF00050 | RNA | FMN |
1
FMN
Corynebacterium glutamicum ATCC 13032 |
1
FMN
Corynebacterium amycolatum SK46 |
1
FMN
Corynebacterium kroppenstedtii DSM 44385 |
Riboflavin biosynthesis | |||||
RF00059 | RNA | TPP |
5
TPP
Corynebacterium glutamicum ATCC 13032 |
4
TPP
Corynebacterium efficiens YS-314 |
3
TPP
Corynebacterium diphtheriae NCTC 13129 |
2
TPP
Corynebacterium aurimucosum ATCC 700975 |
1
TPP
Corynebacterium jeikeium K411 |
3
TPP
Corynebacterium urealyticum DSM 7109 |
2
TPP
Corynebacterium amycolatum SK46 |
3
TPP
Corynebacterium kroppenstedtii DSM 44385 |
Thiamine biosynthesis |
RF00080 | RNA | yybP-ykoY |
3
yybP-ykoY
Corynebacterium glutamicum ATCC 13032 |
1
yybP-ykoY
Corynebacterium efficiens YS-314 |
1
yybP-ykoY
Corynebacterium diphtheriae NCTC 13129 |
1
yybP-ykoY
Corynebacterium aurimucosum ATCC 700975 |
1
yybP-ykoY
Corynebacterium jeikeium K411 |
1
yybP-ykoY
Corynebacterium urealyticum DSM 7109 |
1
yybP-ykoY
Corynebacterium amycolatum SK46 |
1
yybP-ykoY
Corynebacterium kroppenstedtii DSM 44385 |
|
RF00114 | RNA | S15 |
1
S15
Corynebacterium glutamicum ATCC 13032 |
1
S15
Corynebacterium efficiens YS-314 |
1
S15
Corynebacterium diphtheriae NCTC 13129 |
1
S15
Corynebacterium aurimucosum ATCC 700975 |
1
S15
Corynebacterium urealyticum DSM 7109 |
1
S15
Corynebacterium amycolatum SK46 |
1
S15
Corynebacterium kroppenstedtii DSM 44385 |
Ribosome biogenesis | |
RF00162 | RNA | SAM |
1
SAM
Corynebacterium urealyticum DSM 7109 |
Methionine biosynthesis | |||||||
RF00174 | RNA | Cobalamin |
1
Cobalamin
Corynebacterium glutamicum ATCC 13032 |
1
Cobalamin
Corynebacterium diphtheriae NCTC 13129 |
2
Cobalamin
Corynebacterium amycolatum SK46 |
2
Cobalamin
Corynebacterium kroppenstedtii DSM 44385 |
Cobalamin biosynthesis | ||||
RF00230 | RNA | T-box(Ile) |
1
T-box(Ile)
Corynebacterium glutamicum ATCC 13032 |
1
T-box(Ile)
Corynebacterium efficiens YS-314 |
1
T-box(Ile)
Corynebacterium diphtheriae NCTC 13129 |
1
T-box(Ile)
Corynebacterium aurimucosum ATCC 700975 |
1
T-box(Ile)
Corynebacterium jeikeium K411 |
1
T-box(Ile)
Corynebacterium urealyticum DSM 7109 |
1
T-box(Ile)
Corynebacterium amycolatum SK46 |
1
T-box(Ile)
Corynebacterium kroppenstedtii DSM 44385 |
Amino acid metabolism |
RF00379 | RNA | ydaO-yuaA |
2
ydaO-yuaA
Corynebacterium glutamicum ATCC 13032 |
2
ydaO-yuaA
Corynebacterium efficiens YS-314 |
1
ydaO-yuaA
Corynebacterium amycolatum SK46 |
Cell wall metabolism | |||||
RF00380 | RNA | ykoK |
1
ykoK
Corynebacterium amycolatum SK46 |
Magnesium homeostasis | |||||||
RF00504 | RNA | Glycine |
1
Glycine
Corynebacterium jeikeium K411 |
1
Glycine
Corynebacterium kroppenstedtii DSM 44385 |
Glycine metabolism | ||||||
RF00513 | RNA | Trp_leader |
1
Trp_leader
Corynebacterium efficiens YS-314 |
2
Trp_leader
Corynebacterium diphtheriae NCTC 13129 |
Tryptophan biosynthesis | ||||||
RF00515 | RNA | PyrR |
1
PyrR
Corynebacterium glutamicum ATCC 13032 |
1
PyrR
Corynebacterium efficiens YS-314 |
1
PyrR
Corynebacterium diphtheriae NCTC 13129 |
1
PyrR
Corynebacterium aurimucosum ATCC 700975 |
1
PyrR
Corynebacterium jeikeium K411 |
1
PyrR
Corynebacterium kroppenstedtii DSM 44385 |
Pyrimidine metabolism | ||
RF00557 | RNA | L10_leader |
1
L10_leader
Corynebacterium glutamicum ATCC 13032 |
1
L10_leader
Corynebacterium efficiens YS-314 |
1
L10_leader
Corynebacterium diphtheriae NCTC 13129 |
Ribosome biogenesis |