Regulog SufR - Corynebacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	ArsR
Regulation mode:	repressor
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By taxonomy - Corynebacteriaceae
By TF family - ArsR
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Statistics of regulated genes
Genome	Genes	Operons
Corynebacterium amycolatum SK46	7	1
Corynebacterium aurimucosum ATCC 700975	7	1
Corynebacterium diphtheriae NCTC 13129	7	1
Corynebacterium efficiens YS-314	7	1
Corynebacterium glutamicum ATCC 13032	7	1
Corynebacterium jeikeium K411	7	1
Corynebacterium kroppenstedtii DSM 44385	7	1
Corynebacterium urealyticum DSM 7109	7	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
sufR	* Corynebacterium amycolatum SK46 Site: position = -119 score = 7.04522 sequence = TTACGACACAATTATGTTGTCTAA Gene: CORAM0001_0944: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family	* Corynebacterium aurimucosum ATCC 700975 Site: position = -57 score = 7.294 sequence = TTAAGGAACACTAGTGTTGTCTAA Gene: cauri_1215: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family	* Corynebacterium diphtheriae NCTC 13129 Site: position = -163 score = 5.33588 sequence = CTAACCTGCACTTTTGTGGGTTAT Gene: DIP1296: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family	* Corynebacterium efficiens YS-314 Site: position = -72 score = 7.47129 sequence = TTAGGGAACACTTGTGTTGTCTAA Gene: CE1687: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family	* Corynebacterium glutamicum ATCC 13032 Site: position = -58 score = 7.47129 sequence = TTAGGGAACACTTGTGTTGTCTAA Gene: cg1765: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family	* Corynebacterium jeikeium K411 Site: position = -88 score = 7.47129 sequence = TTACGACACACTTTTGTTGTCTAA Gene: jk0985: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family	* Corynebacterium kroppenstedtii DSM 44385 Site: position = -223 score = 6.06671 sequence = TTCCGACACACTAATGTTGTGTAA Gene: ckrop_0953: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family	* Corynebacterium urealyticum DSM 7109 Site: position = -59 score = 7.294 sequence = TTAAGACACACTCTTGTTGTCTAA Gene: cur_1006: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family	Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family
sufB	Corynebacterium amycolatum SK46 Gene: CORAM0001_0945: Iron-sulfur cluster assembly protein SufB	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1216: Iron-sulfur cluster assembly protein SufB	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1295: Iron-sulfur cluster assembly protein SufB	Corynebacterium efficiens YS-314 Gene: CE1686: Iron-sulfur cluster assembly protein SufB	Corynebacterium glutamicum ATCC 13032 Gene: cg1764: Iron-sulfur cluster assembly protein SufB	Corynebacterium jeikeium K411 Gene: jk0984: Iron-sulfur cluster assembly protein SufB	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0952: Iron-sulfur cluster assembly protein SufB	Corynebacterium urealyticum DSM 7109 Gene: cur_1007: Iron-sulfur cluster assembly protein SufB	Iron-sulfur cluster assembly protein SufB
sufD	Corynebacterium amycolatum SK46 Gene: CORAM0001_0946: Iron-sulfur cluster assembly protein SufD	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1217: Iron-sulfur cluster assembly protein SufD	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1294: Iron-sulfur cluster assembly protein SufD	Corynebacterium efficiens YS-314 Gene: CE1685: Iron-sulfur cluster assembly protein SufD	Corynebacterium glutamicum ATCC 13032 Gene: cg1763: Iron-sulfur cluster assembly protein SufD	Corynebacterium jeikeium K411 Gene: jk0983: Iron-sulfur cluster assembly protein SufD	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0951: Iron-sulfur cluster assembly protein SufD	Corynebacterium urealyticum DSM 7109 Gene: cur_1008: Iron-sulfur cluster assembly protein SufD	Iron-sulfur cluster assembly protein SufD
sufC	Corynebacterium amycolatum SK46 Gene: CORAM0001_0947: Iron-sulfur cluster assembly ATPase protein SufC	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1218: Iron-sulfur cluster assembly ATPase protein SufC	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1293: Iron-sulfur cluster assembly ATPase protein SufC	Corynebacterium efficiens YS-314 Gene: CE1684: Iron-sulfur cluster assembly ATPase protein SufC	Corynebacterium glutamicum ATCC 13032 Gene: cg1762: Iron-sulfur cluster assembly ATPase protein SufC	Corynebacterium jeikeium K411 Gene: jk0982: Iron-sulfur cluster assembly ATPase protein SufC	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0950: Iron-sulfur cluster assembly ATPase protein SufC	Corynebacterium urealyticum DSM 7109 Gene: cur_1009: Iron-sulfur cluster assembly ATPase protein SufC	Iron-sulfur cluster assembly ATPase protein SufC
sufS	Corynebacterium amycolatum SK46 Gene: CORAM0001_0948: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1219: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1292: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Corynebacterium efficiens YS-314 Gene: CE1683: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Corynebacterium glutamicum ATCC 13032 Gene: cg1761: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Corynebacterium jeikeium K411 Gene: jk0981: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0948: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Corynebacterium urealyticum DSM 7109 Gene: cur_1010: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
sufU	Corynebacterium amycolatum SK46 Gene: CORAM0001_0949: Iron-sulfur cluster assembly scaffold protein	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1220: Iron-sulfur cluster assembly scaffold protein	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1291: Iron-sulfur cluster assembly scaffold protein	Corynebacterium efficiens YS-314 Gene: CE1682: Iron-sulfur cluster assembly scaffold protein	Corynebacterium glutamicum ATCC 13032 Gene: cg1760: Iron-sulfur cluster assembly scaffold protein	Corynebacterium jeikeium K411 Gene: jk0980: Iron-sulfur cluster assembly scaffold protein	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0947: Iron-sulfur cluster assembly scaffold protein	Corynebacterium urealyticum DSM 7109 Gene: cur_1011: Iron-sulfur cluster assembly scaffold protein	Iron-sulfur cluster assembly scaffold protein
sufT	Corynebacterium amycolatum SK46 Gene: CORAM0001_0950: Predicted Fe-S cluster assembly protein	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1221: Predicted Fe-S cluster assembly protein	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1290: Predicted Fe-S cluster assembly protein	Corynebacterium efficiens YS-314 Gene: CE1681: Predicted Fe-S cluster assembly protein	Corynebacterium glutamicum ATCC 13032 Gene: cg1759: Predicted Fe-S cluster assembly protein	Corynebacterium jeikeium K411 Gene: jk0979: Predicted Fe-S cluster assembly protein	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0946: Predicted Fe-S cluster assembly protein	Corynebacterium urealyticum DSM 7109 Gene: cur_1012: Predicted Fe-S cluster assembly protein	Predicted Fe-S cluster assembly protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog SufR - Corynebacteriaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --