Regulog SufR - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By TF family - ArsR
- By effector - Iron-sulfur cluster redox state
- By pathway - Iron-sulfur cluster biogenesis
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium amycolatum SK46 | 7 | 1 |
| Corynebacterium aurimucosum ATCC 700975 | 7 | 1 |
| Corynebacterium diphtheriae NCTC 13129 | 7 | 1 |
| Corynebacterium efficiens YS-314 | 7 | 1 |
| Corynebacterium glutamicum ATCC 13032 | 7 | 1 |
| Corynebacterium jeikeium K411 | 7 | 1 |
| Corynebacterium kroppenstedtii DSM 44385 | 7 | 1 |
| Corynebacterium urealyticum DSM 7109 | 7 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| sufR |
*
Corynebacterium amycolatum SK46 Site: position = -119 score = 7.04522 sequence = TTACGACACAATTATGTTGTCTAA Gene: CORAM0001_0944: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -57 score = 7.294 sequence = TTAAGGAACACTAGTGTTGTCTAA Gene: cauri_1215: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -163 score = 5.33588 sequence = CTAACCTGCACTTTTGTGGGTTAT Gene: DIP1296: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family |
*
Corynebacterium efficiens YS-314 Site: position = -72 score = 7.47129 sequence = TTAGGGAACACTTGTGTTGTCTAA Gene: CE1687: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -58 score = 7.47129 sequence = TTAGGGAACACTTGTGTTGTCTAA Gene: cg1765: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family |
*
Corynebacterium jeikeium K411 Site: position = -88 score = 7.47129 sequence = TTACGACACACTTTTGTTGTCTAA Gene: jk0985: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -223 score = 6.06671 sequence = TTCCGACACACTAATGTTGTGTAA Gene: ckrop_0953: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family |
*
Corynebacterium urealyticum DSM 7109 Site: position = -59 score = 7.294 sequence = TTAAGACACACTCTTGTTGTCTAA Gene: cur_1006: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family |
Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family |
| sufB |
Gene: CORAM0001_0945: Iron-sulfur cluster assembly protein SufB |
Gene: cauri_1216: Iron-sulfur cluster assembly protein SufB |
Gene: DIP1295: Iron-sulfur cluster assembly protein SufB |
Gene: CE1686: Iron-sulfur cluster assembly protein SufB |
Gene: cg1764: Iron-sulfur cluster assembly protein SufB |
Gene: jk0984: Iron-sulfur cluster assembly protein SufB |
Gene: ckrop_0952: Iron-sulfur cluster assembly protein SufB |
Gene: cur_1007: Iron-sulfur cluster assembly protein SufB |
Iron-sulfur cluster assembly protein SufB |
| sufD |
Gene: CORAM0001_0946: Iron-sulfur cluster assembly protein SufD |
Gene: cauri_1217: Iron-sulfur cluster assembly protein SufD |
Gene: DIP1294: Iron-sulfur cluster assembly protein SufD |
Gene: CE1685: Iron-sulfur cluster assembly protein SufD |
Gene: cg1763: Iron-sulfur cluster assembly protein SufD |
Gene: jk0983: Iron-sulfur cluster assembly protein SufD |
Gene: ckrop_0951: Iron-sulfur cluster assembly protein SufD |
Gene: cur_1008: Iron-sulfur cluster assembly protein SufD |
Iron-sulfur cluster assembly protein SufD |
| sufC |
Gene: CORAM0001_0947: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: cauri_1218: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: DIP1293: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: CE1684: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: cg1762: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: jk0982: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: ckrop_0950: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: cur_1009: Iron-sulfur cluster assembly ATPase protein SufC |
Iron-sulfur cluster assembly ATPase protein SufC |
| sufS |
Gene: CORAM0001_0948: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: cauri_1219: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: DIP1292: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: CE1683: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: cg1761: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: jk0981: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: ckrop_0948: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: cur_1010: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
| sufU |
Gene: CORAM0001_0949: Iron-sulfur cluster assembly scaffold protein |
Gene: cauri_1220: Iron-sulfur cluster assembly scaffold protein |
Gene: DIP1291: Iron-sulfur cluster assembly scaffold protein |
Gene: CE1682: Iron-sulfur cluster assembly scaffold protein |
Gene: cg1760: Iron-sulfur cluster assembly scaffold protein |
Gene: jk0980: Iron-sulfur cluster assembly scaffold protein |
Gene: ckrop_0947: Iron-sulfur cluster assembly scaffold protein |
Gene: cur_1011: Iron-sulfur cluster assembly scaffold protein |
Iron-sulfur cluster assembly scaffold protein |
| sufT |
Gene: CORAM0001_0950: Predicted Fe-S cluster assembly protein |
Gene: cauri_1221: Predicted Fe-S cluster assembly protein |
Gene: DIP1290: Predicted Fe-S cluster assembly protein |
Gene: CE1681: Predicted Fe-S cluster assembly protein |
Gene: cg1759: Predicted Fe-S cluster assembly protein |
Gene: jk0979: Predicted Fe-S cluster assembly protein |
Gene: ckrop_0946: Predicted Fe-S cluster assembly protein |
Gene: cur_1012: Predicted Fe-S cluster assembly protein |
Predicted Fe-S cluster assembly protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |