Regulog NrtR - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | NrtR |
| Regulation mode: | repressor |
| Biological process: | NAD biosynthesis |
| Effector: | Adenosine diphosphate ribose |
| Phylum: | Actinobacteria |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By trascription factor - NrtR
- By TF family - NrtR
- By effector - Adenosine diphosphate ribose
- By pathway - NAD biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium amycolatum SK46 | ||
| Corynebacterium aurimucosum ATCC 700975 | ||
| Corynebacterium diphtheriae NCTC 13129 | 3 | 1 |
| Corynebacterium efficiens YS-314 | 4 | 1 |
| Corynebacterium glutamicum ATCC 13032 | 4 | 1 |
| Corynebacterium jeikeium K411 | ||
| Corynebacterium kroppenstedtii DSM 44385 | ||
| Corynebacterium urealyticum DSM 7109 | 5 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| nrtR |
|
|
Gene: DIP2256: Nudix-related transcriptional regulator NrtR |
*
Corynebacterium efficiens YS-314 Site: position = -45 score = 6.18689 sequence = TTTGAGTCACCGTGACTGTAA Site: position = -11 score = 6.11238 sequence = ATAAAGTCACCTTGACCCTAA Gene: CE1117: Nudix-related transcriptional regulator NrtR |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -64 score = 6.55056 sequence = TTAGAGTCAAAGTGACTGTAA Site: position = -30 score = 6.47605 sequence = TTAAAGTCAGATTGACCCTAA Gene: cg1218: Nudix-related transcriptional regulator NrtR |
|
|
*
Corynebacterium urealyticum DSM 7109 Site: position = -39 score = 5.76621 sequence = TTAGTGTCAATATGACATTAA Gene: cur_0072: Nudix-related transcriptional regulator NrtR |
Nudix-related transcriptional regulator NrtR |
| nadA |
Gene: CORAM0001_1063: Quinolinate synthetase (EC 4.1.99.-) |
|
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -31 score = 4.3204 sequence = TTATCGCCCGACAGTCGAAAA Gene: DIP2257: Quinolinate synthetase (EC 4.1.99.-) |
Gene: CE1116: Quinolinate synthetase (EC 4.1.99.-) |
Gene: cg1216: Quinolinate synthetase (EC 4.1.99.-) |
Gene: jk0783: Quinolinate synthetase (EC 4.1.99.-) |
|
Gene: cur_0073: Quinolinate synthetase (EC 4.1.99.-) |
Quinolinate synthetase (EC 4.1.99.-) |
| nadB |
Gene: CORAM0001_1062: L-aspartate oxidase (EC 1.4.3.16) |
|
Gene: DIP2258: L-aspartate oxidase (EC 1.4.3.16) |
|
|
|
|
Gene: cur_0074: L-aspartate oxidase (EC 1.4.3.16) |
L-aspartate oxidase (EC 1.4.3.16) |
| nadC |
Gene: CORAM0001_1061: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
|
Gene: DIP2259: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
Gene: CE1115: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
Gene: cg1215: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
Gene: jk0784: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
|
Gene: cur_0075: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
| sufS |
|
|
|
Gene: CE1114: Cysteine desulfurase (EC 2.8.1.7) |
Gene: cg1214: Cysteine desulfurase (EC 2.8.1.7) |
|
|
Gene: cur_0076: Cysteine desulfurase (EC 2.8.1.7) |
Cysteine desulfurase (EC 2.8.1.7) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |