Regulog NrtR - Corynebacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	NrtR
Regulation mode:	repressor
Biological process:	NAD biosynthesis
Effector:	Adenosine diphosphate ribose
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Corynebacteriaceae
By trascription factor - NrtR
By TF family - NrtR
By effector - Adenosine diphosphate ribose
By pathway - NAD biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Corynebacterium amycolatum SK46
Corynebacterium aurimucosum ATCC 700975
Corynebacterium diphtheriae NCTC 13129	3	1
Corynebacterium efficiens YS-314	4	1
Corynebacterium glutamicum ATCC 13032	4	1
Corynebacterium jeikeium K411
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium urealyticum DSM 7109	5	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
nrtR	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975	Corynebacterium diphtheriae NCTC 13129 Gene: DIP2256: Nudix-related transcriptional regulator NrtR	* Corynebacterium efficiens YS-314 Site: position = -45 score = 6.18689 sequence = TTTGAGTCACCGTGACTGTAA Site: position = -11 score = 6.11238 sequence = ATAAAGTCACCTTGACCCTAA Gene: CE1117: Nudix-related transcriptional regulator NrtR	* Corynebacterium glutamicum ATCC 13032 Site: position = -64 score = 6.55056 sequence = TTAGAGTCAAAGTGACTGTAA Site: position = -30 score = 6.47605 sequence = TTAAAGTCAGATTGACCCTAA Gene: cg1218: Nudix-related transcriptional regulator NrtR	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	* Corynebacterium urealyticum DSM 7109 Site: position = -39 score = 5.76621 sequence = TTAGTGTCAATATGACATTAA Gene: cur_0072: Nudix-related transcriptional regulator NrtR	Nudix-related transcriptional regulator NrtR
nadA	Corynebacterium amycolatum SK46 Gene: CORAM0001_1063: Quinolinate synthetase (EC 4.1.99.-)	Corynebacterium aurimucosum ATCC 700975	* Corynebacterium diphtheriae NCTC 13129 Site: position = -31 score = 4.3204 sequence = TTATCGCCCGACAGTCGAAAA Gene: DIP2257: Quinolinate synthetase (EC 4.1.99.-)	Corynebacterium efficiens YS-314 Gene: CE1116: Quinolinate synthetase (EC 4.1.99.-)	Corynebacterium glutamicum ATCC 13032 Gene: cg1216: Quinolinate synthetase (EC 4.1.99.-)	Corynebacterium jeikeium K411 Gene: jk0783: Quinolinate synthetase (EC 4.1.99.-)	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109 Gene: cur_0073: Quinolinate synthetase (EC 4.1.99.-)	Quinolinate synthetase (EC 4.1.99.-)
nadB	Corynebacterium amycolatum SK46 Gene: CORAM0001_1062: L-aspartate oxidase (EC 1.4.3.16)	Corynebacterium aurimucosum ATCC 700975	Corynebacterium diphtheriae NCTC 13129 Gene: DIP2258: L-aspartate oxidase (EC 1.4.3.16)	Corynebacterium efficiens YS-314	Corynebacterium glutamicum ATCC 13032	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109 Gene: cur_0074: L-aspartate oxidase (EC 1.4.3.16)	L-aspartate oxidase (EC 1.4.3.16)
nadC	Corynebacterium amycolatum SK46 Gene: CORAM0001_1061: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	Corynebacterium aurimucosum ATCC 700975	Corynebacterium diphtheriae NCTC 13129 Gene: DIP2259: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	Corynebacterium efficiens YS-314 Gene: CE1115: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	Corynebacterium glutamicum ATCC 13032 Gene: cg1215: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	Corynebacterium jeikeium K411 Gene: jk0784: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109 Gene: cur_0075: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)
sufS	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975	Corynebacterium diphtheriae NCTC 13129	Corynebacterium efficiens YS-314 Gene: CE1114: Cysteine desulfurase (EC 2.8.1.7)	Corynebacterium glutamicum ATCC 13032 Gene: cg1214: Cysteine desulfurase (EC 2.8.1.7)	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109 Gene: cur_0076: Cysteine desulfurase (EC 2.8.1.7)	Cysteine desulfurase (EC 2.8.1.7)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog NrtR - Corynebacteriaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --