Regulog Glycine - Corynebacteriaceae
| Regulator type: | RNA regulatory element |
| Name: | Glycine |
| RFAM: | RF00504 |
| Regulation mode: | |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Phylum: | Actinobacteria |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By RNA motif - Glycine
- By effector - Glycine
- By pathway - Glycine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium glutamicum ATCC 13032 | ||
| Corynebacterium efficiens YS-314 | ||
| Corynebacterium diphtheriae NCTC 13129 | ||
| Corynebacterium aurimucosum ATCC 700975 | ||
| Corynebacterium jeikeium K411 | 3 | 1 |
| Corynebacterium urealyticum DSM 7109 | ||
| Corynebacterium amycolatum SK46 | ||
| Corynebacterium kroppenstedtii DSM 44385 | 3 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| gcvP |
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Gene: cauri_1713: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
*
Corynebacterium jeikeium K411 Site: position = -255 score = 35.33 sequence = TAGCTGTGGTGGGAG... Site: position = -158 score = 50.47 sequence = GAGGCAACTCTGGAA... Gene: jk0209: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: cur_1794: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
|
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -317 score = 37.87 sequence = GAGTTGCAACGGGAG... Site: position = -200 score = 40.82 sequence = GAGGCACCACTGGAA... Gene: ckrop_0298: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
| gcvT |
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|
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Gene: cauri_1714: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
Gene: jk0210: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
Gene: cur_1793: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
|
Gene: ckrop_0299: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
| gcvH |
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Gene: jk0211: Glycine cleavage system H protein |
Gene: cur_1792: Glycine cleavage system H protein |
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Gene: ckrop_0300: Glycine cleavage system H protein |
Glycine cleavage system H protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |