Regulog Glycine - Corynebacteriaceae

Properties
Regulator type:	RNA regulatory element
Name:	Glycine
RFAM:	RF00504
Regulation mode:
Biological process:	Glycine metabolism
Effector:	Glycine
Phylum:	Actinobacteria

Member of regulog collections

By taxonomy - Corynebacteriaceae
By RNA motif - Glycine
By effector - Glycine
By pathway - Glycine metabolism

Statistics of regulated genes
Genome	Genes	Operons
Corynebacterium glutamicum ATCC 13032
Corynebacterium efficiens YS-314
Corynebacterium diphtheriae NCTC 13129
Corynebacterium aurimucosum ATCC 700975
Corynebacterium jeikeium K411	3	1
Corynebacterium urealyticum DSM 7109
Corynebacterium amycolatum SK46
Corynebacterium kroppenstedtii DSM 44385	3	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
gcvP	Corynebacterium glutamicum ATCC 13032	Corynebacterium efficiens YS-314	Corynebacterium diphtheriae NCTC 13129	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1713: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	* Corynebacterium jeikeium K411 Site: position = -255 score = 35.33 sequence = TAGCTGTGGTGGGAG... Site: position = -158 score = 50.47 sequence = GAGGCAACTCTGGAA... Gene: jk0209: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	Corynebacterium urealyticum DSM 7109 Gene: cur_1794: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	Corynebacterium amycolatum SK46	* Corynebacterium kroppenstedtii DSM 44385 Site: position = -317 score = 37.87 sequence = GAGTTGCAACGGGAG... Site: position = -200 score = 40.82 sequence = GAGGCACCACTGGAA... Gene: ckrop_0298: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT	Corynebacterium glutamicum ATCC 13032	Corynebacterium efficiens YS-314	Corynebacterium diphtheriae NCTC 13129	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1714: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	Corynebacterium jeikeium K411 Gene: jk0210: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	Corynebacterium urealyticum DSM 7109 Gene: cur_1793: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	Corynebacterium amycolatum SK46	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0299: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH	Corynebacterium glutamicum ATCC 13032	Corynebacterium efficiens YS-314	Corynebacterium diphtheriae NCTC 13129	Corynebacterium aurimucosum ATCC 700975	Corynebacterium jeikeium K411 Gene: jk0211: Glycine cleavage system H protein	Corynebacterium urealyticum DSM 7109 Gene: cur_1792: Glycine cleavage system H protein	Corynebacterium amycolatum SK46	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0300: Glycine cleavage system H protein	Glycine cleavage system H protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Glycine - Corynebacteriaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --