Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Corynebacterium amycolatum SK46

Properties
Regulator type: Transcription factor
TF locus tag: CORAM0001_0857
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Corynebacteriaceae
Statistics of regulated genes:
- Genes 19
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 109 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -134
Score: 4
Sequence: TCGGAAAAAAGTTCGA
Position: -91
Score: 4.9
Sequence: TCGAATGGGTGTACGA
Locus tag: CORAM0001_1381
Name: cg2683
Funciton: Conserved hypothetical protein
CORAM0001_1381
cg2683
Conserved hypothetical protein
Position: -141
Score: 5.2
Sequence: TCGAACACGCGTGCTA
Locus tag: CORAM0001_0623
Name: helZ
Funciton: SNF2 family DNA/RNA helicase
Locus tag: CORAM0001_0624
Name: cg1317
Funciton: SWF/SNF family helicase
Locus tag: CORAM0001_0625
Name: sbcD
Funciton: DNA repair exonuclease SbcD
Locus tag: CORAM0001_0626
Name: sbcC
Funciton: ATPase involved in DNA repair
CORAM0001_0623
helZ
SNF2 family DNA/RNA helicase
CORAM0001_0624
cg1317
SWF/SNF family helicase
CORAM0001_0625
sbcD
DNA repair exonuclease SbcD
CORAM0001_0626
sbcC
ATPase involved in DNA repair
Position: -89
Score: 5
Sequence: TCGAACGTACGTGCTA
Locus tag: CORAM0001_0278
Name: cg0713
Funciton: Conserved hypothetical protein
Locus tag: CORAM0001_0279
Name: dinP
Funciton: DNA polymerase IV
CORAM0001_0278
cg0713
Conserved hypothetical protein
CORAM0001_0279
dinP
DNA polymerase IV
Position: -89
Score: 5.1
Sequence: TCGAATGGGTGTGCGA
Locus tag: CORAM0001_0220
Name: cg2683
Funciton: Conserved hypothetical protein
CORAM0001_0220
cg2683
Conserved hypothetical protein
Position: -140
Score: 4
Sequence: TCGAACAGGGTTTCGC
Locus tag: CORAM0001_0838
Name: recA
Funciton: Recombination protein RecA
Locus tag: CORAM0001_0839
Name: recX
Funciton: Recombination regulator RecX
CORAM0001_0838
recA
Recombination protein RecA
CORAM0001_0839
recX
Recombination regulator RecX
Position: -79
Score: 4.5
Sequence: CTGAACACATGTGCGA
Locus tag: CORAM0001_1690
Name: uvrA
Funciton: Excinuclease ABC, subunit A
CORAM0001_1690
uvrA
Excinuclease ABC, subunit A
Position: -123
Score: 5.5
Sequence: TCGAACAGATGTGCGA
Locus tag: CORAM0001_1116
Name: cg2381
Funciton: Conserved hypothetical protein
CORAM0001_1116
cg2381
Conserved hypothetical protein
Position: -49
Score: 4.8
Sequence: TCGAAAATACGTTTGA
Locus tag: CORAM0001_0285
Name: dnaE2
Funciton: Error-prone DNA polymerase
CORAM0001_0285
dnaE2
Error-prone DNA polymerase
Position: -227
Score: 4.4
Sequence: TCAAACGACTGTTCGA
Locus tag: CORAM0001_0857
Name: lexA
Funciton: SOS-response repressor LexA
CORAM0001_0857
lexA
SOS-response repressor LexA
Position: -101
Score: 5.2
Sequence: TCGAATGGATGTTCGA
Locus tag: CORAM0001_0615
Name: modC
Funciton: Modification methylase NgoMIV (EC 2.1.1.37)
Locus tag: CORAM0001_0617
Name: blt
Funciton: Predicted permease
CORAM0001_0615
modC
Modification methylase NgoMIV (EC 2.1.1.37)
CORAM0001_0617
blt
Predicted permease
Position: -63
Score: 4.1
Sequence: ACAAACAGCTGTTCGA
Locus tag: CORAM0001_2122
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: CORAM0001_2123
Name: ruvA
Funciton: Holliday junction DNA helicase (EC 3.6.4.12) motor protein
Locus tag: CORAM0001_2124
Name: ruvB
Funciton: holliday junction DNA helicase RuvB (EC 3.6.4.12)
CORAM0001_2122
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
CORAM0001_2123
ruvA
Holliday junction DNA helicase (EC 3.6.4.12) motor protein
CORAM0001_2124
ruvB
holliday junction DNA helicase RuvB (EC 3.6.4.12)
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