Regulog LexA - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium glutamicum ATCC 13032 | 39 | 30 |
| Corynebacterium efficiens YS-314 | 23 | 16 |
| Corynebacterium diphtheriae NCTC 13129 | 13 | 9 |
| Corynebacterium jeikeium K411 | 13 | 8 |
| Corynebacterium urealyticum DSM 7109 | 11 | 7 |
| Corynebacterium aurimucosum ATCC 700975 | 12 | 8 |
| Corynebacterium amycolatum SK46 | 19 | 11 |
| Corynebacterium kroppenstedtii DSM 44385 | 11 | 7 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| divS |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -85 score = 4.34413 sequence = TCGAACATGTGAACGG Site: position = -165 score = 4.57825 sequence = TGGTACGAGTGTTCGA Gene: cg2113: SOS-inducible cell-division suppressor |
*
Corynebacterium efficiens YS-314 Site: position = -107 score = 4.57825 sequence = TGGTACGAGTGTTCGA Site: position = -28 score = 4.9678 sequence = TCGAACATGTGAACGA Gene: CE1822: SOS-inducible cell-division suppressor |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -87 score = 4.7026 sequence = TCGAACATGTTGTCGA Gene: DIP1425: SOS-inducible cell-division suppressor |
|
*
Corynebacterium urealyticum DSM 7109 Site: position = -145 score = 4.75301 sequence = TAGAACACCCGTTCGA Site: position = -180 score = 5.11295 sequence = TCGAACGTGCGTGCTA Gene: cur_0885: SOS-inducible cell-division suppressor |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -180 score = 4.39676 sequence = AGGAAAAAATGTTCGA Site: position = -100 score = 4.74272 sequence = TCGAACGGTTGGTCGA Gene: cauri_1476: SOS-inducible cell-division suppressor |
|
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -52 score = 4.04094 sequence = GGGATGAGATGTTCGA Gene: ckrop_2122: SOS-inducible cell-division suppressor |
SOS-inducible cell-division suppressor |
| CRON 2. | |||||||||
| putP |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -259 score = 4.07478 sequence = TCGTAACCTTGTGCGA Gene: cg1314: Sodium/proline symporter |
*
Corynebacterium efficiens YS-314 Site: position = -300 score = 4.19587 sequence = TCGTATCCATGTGCGA Gene: CE1262: Sodium/proline symporter |
Gene: DIP1022: Sodium/proline symporter |
Gene: jk1363: Sodium/proline symporter |
Gene: cur_0687: Sodium/proline symporter |
Gene: cauri_1030: Sodium/proline symporter |
Gene: CORAM0001_0622: Sodium/proline symporter |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -252 score = 5.18758 sequence = TCGAACATATTTTCGA Gene: ckrop_1307: Sodium/proline symporter |
Sodium/proline symporter |
| CRON 3. | |||||||||
| ruvC |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -104 score = 4.15799 sequence = TCGCAATTGTGTGCTA Gene: cg1871: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
*
Corynebacterium efficiens YS-314 Site: position = -37 score = 4.08208 sequence = TCGCAATTATGTGCTA Gene: CE1775: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -123 score = 4.08208 sequence = TCGCAATTATGTGCTA Gene: DIP1377: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
*
Corynebacterium jeikeium K411 Site: position = -30 score = 4.65902 sequence = TAAAACACGTGTGCTA Gene: jk1056: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
*
Corynebacterium urealyticum DSM 7109 Site: position = -52 score = 5.22688 sequence = TCGATCATGTGTGCTA Gene: cur_0934: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -10 score = 4.38823 sequence = TAGAACACATGTGTGT Gene: cauri_1419: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
*
Corynebacterium amycolatum SK46 Site: position = -63 score = 4.08998 sequence = ACAAACAGCTGTTCGA Gene: CORAM0001_2122: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
Gene: ckrop_1031: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
| ruvA |
Gene: cg1870: Holliday junction DNA helicase (EC 3.6.4.12) motor protein |
Gene: CE1774: Holliday junction DNA helicase (EC 3.6.4.12) motor protein |
Gene: DIP1376: Holliday junction DNA helicase (EC 3.6.4.12) motor protein |
Gene: jk1055: Holliday junction DNA helicase (EC 3.6.4.12) motor protein |
Gene: cur_0935: Holliday junction DNA helicase (EC 3.6.4.12) motor protein |
Gene: cauri_1418: Holliday junction DNA helicase (EC 3.6.4.12) motor protein |
Gene: CORAM0001_2123: Holliday junction DNA helicase (EC 3.6.4.12) motor protein |
Gene: ckrop_1030: Holliday junction DNA helicase (EC 3.6.4.12) motor protein |
Holliday junction DNA helicase RuvA (EC 3.6.4.12) |
| ruvB |
Gene: cg1869: holliday junction DNA helicase RuvB (EC 3.6.4.12) |
Gene: CE1773: holliday junction DNA helicase RuvB (EC 3.6.4.12) |
Gene: DIP1375: holliday junction DNA helicase RuvB (EC 3.6.4.12) |
Gene: jk1054: holliday junction DNA helicase RuvB (EC 3.6.4.12) |
Gene: cur_0936: holliday junction DNA helicase RuvB (EC 3.6.4.12) |
Gene: cauri_1417: holliday junction DNA helicase RuvB (EC 3.6.4.12) |
Gene: CORAM0001_2124: holliday junction DNA helicase RuvB (EC 3.6.4.12) |
Gene: ckrop_1029: holliday junction DNA helicase RuvB (EC 3.6.4.12) |
holliday junction DNA helicase RuvB (EC 3.6.4.12) |
| CRON 4. | |||||||||
| cg1427 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -63 score = 4.49833 sequence = TTGAACAAATGTTCGG Gene: cg1427: hypothetical protein |
*
Corynebacterium efficiens YS-314 Site: position = -128 score = 4.09629 sequence = CTGAACATATATTCGA Gene: CE1360: hypothetical protein |
|
|
|
Gene: cauri_2080: putative secreted protein |
|
|
Conserved hypothetical protein |
| Cg1429 |
Gene: cg1429: conserved hypothetical protein |
Gene: CE1361: conserved hypothetical protein |
|
|
|
Gene: cauri_1123: conserved hypothetical protein |
Gene: CORAM0001_0691: conserved hypothetical protein |
|
conserved hypothetical protein |
| CRON 5. | |||||||||
| cg1884 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -297 score = 4.26171 sequence = TCGCACATTTTTTCTA Gene: cg1884: Conserved hypothetical protein |
Gene: CE1788: Conserved hypothetical protein |
|
|
|
|
|
|
Conserved hypothetical protein |
| CRON 6. | |||||||||
| cg2026 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -102 score = 4.13038 sequence = TAGCACATATTTTCTA Gene: cg2026: Hypothetical protein |
|
|
|
|
|
|
|
Hypothetical protein |
| CRON 7. | |||||||||
| cg0875 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -37 score = 4.66864 sequence = TAGAACATATGTACCA Gene: cg0875: Conserved hypothetical protein |
*
Corynebacterium efficiens YS-314 Site: position = -41 score = 4.13273 sequence = TAGAACATACGTACAA Gene: CE0781: Conserved hypothetical protein |
|
|
|
|
|
|
Conserved hypothetical protein |
| CRON 8. | |||||||||
| cg0841 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -87 score = 4.01524 sequence = TCGAAAGTATTTCCGA Gene: cg0841: Hypothetical protein |
|
|
|
|
|
|
|
Hypothetical protein |
| CRON 9. | |||||||||
| cg0742 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -100 score = 3.69412 sequence = TCAAGCACCCGTTCGA Gene: cg0742: Hypothetical protein |
Gene: CE0652: Hypothetical protein |
|
|
|
|
|
|
Hypothetical protein |
| CRON 10. | |||||||||
| cg0834 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -62 score = 3.69143 sequence = ACACAAACGTGTTCGA Gene: cg0834: Predicted ABC transporter, substrate binding protein |
Gene: CE0751: Predicted ABC transporter, substrate binding protein |
|
|
Gene: cur_0461: Predicted ABC transporter, substrate binding protein |
Gene: cauri_0569: Predicted ABC transporter, substrate binding protein |
|
|
Predicted ABC transporter, substrate binding protein |
| CRON 11. | |||||||||
| ftsK |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -68 score = 4.07559 sequence = TAGAAAACTTGGACGA Gene: cg2158: cell division protein, required for cell division and chromosomepartitioning |
Gene: CE1861: cell division protein, required for cell division and chromosomepartitioning |
Gene: DIP1461: cell division protein, required for cell division and chromosomepartitioning |
Gene: jk1126: cell division protein, required for cell division and chromosomepartitioning |
|
Gene: cauri_1512: cell division protein, required for cell division and chromosomepartitioning |
Gene: CORAM0001_0828: cell division protein, required for cell division and chromosomepartitioning |
Gene: ckrop_1122: cell division protein, required for cell division and chromosomepartitioning |
cell division protein, required for cell division and chromosomepartitioning |
| CRON 12. | |||||||||
| cg2034 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -22 score = 3.97968 sequence = CCGATCAAATGTTTGA Gene: cg2034: Hypothetical protein |
|
|
|
|
|
|
|
Hypothetical protein |
| CRON 13. | |||||||||
| cg1080 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -30 score = 3.83787 sequence = ATGAAAATTTGTTTGA Gene: cg1080: Predicted multicopper oxidase |
*
Corynebacterium efficiens YS-314 Site: position = -200 score = 3.84974 sequence = TGGAACCGATGATCCA Gene: CE1018: Predicted multicopper oxidase |
|
|
|
Gene: cauri_0896: Predicted multicopper oxidase |
|
|
Predicted multicopper oxidase |
| CRON 14. | |||||||||
| cg2733 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -88 score = 4.90921 sequence = TCGAATAACTGTTCGA Gene: cg2733: HNH nuclease |
|
|
|
|
|
|
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HNH nuclease |
| CRON 15. | |||||||||
| cg0470 |
*2
Corynebacterium glutamicum ATCC 13032 Site: position = -201 score = 5.33332 sequence = TGGAAAATATGTTCGA Gene: cg0470: Hypothetical protein Gene: cg0471: Hypothetical protein |
|
|
|
|
|
|
|
Hypothetical protein |
| CRON 16. | |||||||||
| blt |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -79 score = 5.08001 sequence = TCGATAATATGTTCTA Gene: cg1288: Predicted permease |
*
Corynebacterium efficiens YS-314 Site: position = -80 score = 4.68663 sequence = TAGAAAACATGTTTGA Gene: CE1207: Predicted permease |
|
|
Gene: cur_0340: Predicted permease |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -50 score = 4.49934 sequence = TAGAACTATTGTTCGA Gene: cauri_1016: Predicted permease |
Gene: CORAM0001_0617: Predicted permease |
|
Predicted permease |
| cg1289 |
Gene: cg1289: Predicted multidrug resistance protein |
Gene: CE1208: Predicted multidrug resistance protein |
|
|
|
|
|
|
Predicted multidrug resistance protein |
| modC |
|
|
|
*
Corynebacterium jeikeium K411 Site: position = -125 score = 4.66234 sequence = TAGAGCATATGTTCTA Gene: jk1858: Modification methylase NgoMIV (EC 2.1.1.37) |
|
|
*
Corynebacterium amycolatum SK46 Site: position = -101 score = 5.1848 sequence = TCGAATGGATGTTCGA Gene: CORAM0001_0615: Modification methylase NgoMIV (EC 2.1.1.37) |
|
Modification methylase NgoMIV (EC 2.1.1.37) |
| CRON 17. | |||||||||
| cg1255 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -68 score = 5.27626 sequence = TCGAATAAATGTTCGA Gene: cg1255: HNH endonuclease |
|
|
|
|
|
|
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HNH endonuclease |
| CRON 18. | |||||||||
| radA |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -48 score = 3.49431 sequence = TCGAACACCGTTTCTC Gene: cg2950: DNA repair protein RadA |
*
Corynebacterium efficiens YS-314 Site: position = -35 score = 4.38283 sequence = TCGAACATGTTTTTGT Gene: CE2524: DNA repair protein RadA |
Gene: DIP1977: DNA repair protein RadA |
Gene: jk0305: DNA repair protein RadA |
Gene: cur_1678: DNA repair protein RadA |
Gene: cauri_2218: DNA repair protein RadA |
Gene: CORAM0001_1258: DNA repair protein RadA |
|
DNA repair protein RadA |
| CRON 19. | |||||||||
| uvrA |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -66 score = 4.52969 sequence = TCGATGCTATGTTCGA Gene: cg1560: Excinuclease ABC, subunit A |
*
Corynebacterium efficiens YS-314 Site: position = -76 score = 4.25997 sequence = TCGTTGGTATGTTCGA Gene: CE1507: Excinuclease ABC, subunit A |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -145 score = 4.32049 sequence = TCGGTAGTATGTTCGA Gene: DIP1159: Excinuclease ABC, subunit A |
Gene: jk0832: Excinuclease ABC, subunit A |
Gene: cur_1125: Excinuclease ABC, subunit A |
Gene: cauri_1362: Excinuclease ABC, subunit A |
*
Corynebacterium amycolatum SK46 Site: position = -79 score = 4.47588 sequence = CTGAACACATGTGCGA Gene: CORAM0001_1690: Excinuclease ABC, subunit A |
Gene: ckrop_0827: Excinuclease ABC, subunit A |
Excinuclease ABC, subunit A |
| CRON 20. | |||||||||
| cg0713 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -40 score = 5.48827 sequence = TGGAACAGGTGTTCGA Gene: cg0713: Conserved hypothetical protein |
*
Corynebacterium efficiens YS-314 Site: position = 5 score = 5.35437 sequence = TGGAACACATGTTCTA Gene: CE0627: Conserved hypothetical protein |
Gene: DIP0603: Conserved hypothetical protein |
*
Corynebacterium jeikeium K411 Site: position = -99 score = 5.40609 sequence = TAGAACACGTGTTCTA Gene: jk1717: Conserved hypothetical protein |
*
Corynebacterium urealyticum DSM 7109 Site: position = -165 score = 5.07077 sequence = TAGAACACCTGTTCGA Gene: cur_0403: Conserved hypothetical protein |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -16 score = 4.81487 sequence = TCAAACAGGTGTTCGT Gene: cauri_0492: Conserved hypothetical protein |
*
Corynebacterium amycolatum SK46 Site: position = -89 score = 5.03705 sequence = TCGAACGTACGTGCTA Gene: CORAM0001_0278: Conserved hypothetical protein |
Gene: ckrop_0326: Conserved hypothetical protein |
Conserved hypothetical protein |
| dinP |
Gene: cg0714: DNA polymerase IV |
Gene: CE0628: DNA polymerase IV |
Gene: DIP0604: DNA polymerase IV |
Gene: jk1716: DNA polymerase IV |
Gene: cur_0404: DNA polymerase IV |
Gene: cauri_0493: DNA polymerase IV |
Gene: CORAM0001_0279: DNA polymerase IV |
Gene: ckrop_0327: DNA polymerase IV |
DNA polymerase IV |
| CRON 21. | |||||||||
| recA |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -240 score = 4.98122 sequence = TCGAACAGTTGTGCGT Gene: cg2141: Recombination protein RecA |
*
Corynebacterium efficiens YS-314 Site: position = -213 score = 4.98122 sequence = TCGAACAGTTGTGCGT Gene: CE1849: Recombination protein RecA |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -204 score = 4.89414 sequence = TCGAACATGTATTCGT Gene: DIP1450: Recombination protein RecA |
*
Corynebacterium jeikeium K411 Site: position = -175 score = 4.56899 sequence = TCGAACAAAGGTTCGT Gene: jk1116: Recombination protein RecA |
*
Corynebacterium urealyticum DSM 7109 Site: position = -307 score = 4.56899 sequence = TCGAACAAAGGTTCGT Gene: cur_0874: Recombination protein RecA |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -211 score = 4.51957 sequence = TCGAACACTTGTGTGT Gene: cauri_1500: Recombination protein RecA |
*
Corynebacterium amycolatum SK46 Site: position = -140 score = 3.99527 sequence = TCGAACAGGGTTTCGC Gene: CORAM0001_0838: Recombination protein RecA |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -245 score = 4.53453 sequence = TCGAACATACGTTTGC Gene: ckrop_1113: Recombination protein RecA |
Recombination protein RecA |
| recX |
Gene: cg2140: Recombination regulator RecX |
Gene: CE1848: Recombination regulator RecX |
Gene: DIP1449: Recombination regulator RecX |
Gene: jk1115: Recombination regulator RecX |
Gene: cur_0875: Recombination regulator RecX |
Gene: cauri_1499: Recombination regulator RecX |
Gene: CORAM0001_0839: Recombination regulator RecX |
Gene: ckrop_1111: Recombination regulator RecX |
Recombination regulator RecX |
| CRON 22. | |||||||||
| recN |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -49 score = 4.22238 sequence = TAGAAAAAACGTTCGC Gene: cg1602: DNA repair protein RecN |
*
Corynebacterium efficiens YS-314 Site: position = -107 score = 4.60135 sequence = TCGGATGTGTGTGCGA Gene: CE1548: DNA repair protein RecN |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -47 score = 4.21556 sequence = TAGAACACCTGTTCCT Gene: DIP1182: DNA repair protein RecN |
Gene: jk0866: DNA repair protein RecN |
Gene: cur_1095: DNA repair protein RecN |
Gene: cauri_1331: DNA repair protein RecN |
Gene: CORAM0001_1929: DNA repair protein RecN |
Gene: ckrop_0852: DNA repair protein RecN |
DNA repair protein RecN |
| CRON 23. | |||||||||
| dnaE2 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -19 score = 5.05873 sequence = TGGAAAATTTGTTCTA Gene: cg0738: Error-prone DNA polymerase |
*
Corynebacterium efficiens YS-314 Site: position = -26 score = 4.72448 sequence = TGGAAAGAATGTTCTA Gene: CE0632: Error-prone DNA polymerase |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -32 score = 4.23326 sequence = GTGAACATGTGTGTGA Gene: DIP0612: Error-prone DNA polymerase |
*
Corynebacterium jeikeium K411 Site: position = -8 score = 5.23154 sequence = TAGAATATGTGTTCTA Gene: jk1709: Error-prone DNA polymerase |
*
Corynebacterium urealyticum DSM 7109 Site: position = -36 score = 5.4007 sequence = TCGAATAGATGTTCGA Gene: cur_0412: Error-prone DNA polymerase |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -33 score = 5.17628 sequence = TGGAATACATGTTCGA Gene: cauri_0500: Error-prone DNA polymerase |
*
Corynebacterium amycolatum SK46 Site: position = -49 score = 4.77833 sequence = TCGAAAATACGTTTGA Gene: CORAM0001_0285: Error-prone DNA polymerase |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -191 score = 4.99207 sequence = TCGAACACGCGTACTA Gene: ckrop_0333: Error-prone DNA polymerase |
Error-prone DNA polymerase |
| CRON 24. | |||||||||
| helZ |
Gene: cg1316: SNF2 family DNA/RNA helicase |
Gene: CE1263: SNF2 family DNA/RNA helicase |
Gene: DIP1023: SNF2 family DNA/RNA helicase |
Gene: jk1362: SNF2 family DNA/RNA helicase |
Gene: cur_0688: SNF2 family DNA/RNA helicase |
Gene: cauri_1031: SNF2 family DNA/RNA helicase |
*
Corynebacterium amycolatum SK46 Site: position = -141 score = 5.21766 sequence = TCGAACACGCGTGCTA Gene: CORAM0001_0623: SNF2 family DNA/RNA helicase |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -117 score = 5.6074 sequence = TCGAAAATATGTTCGA Gene: ckrop_1305: SNF2 family DNA/RNA helicase |
SNF2 family DNA/RNA helicase |
| cg1317 |
Gene: cg1317: SWF/SNF family helicase |
Gene: CE1264: SWF/SNF family helicase |
Gene: DIP1024: SWF/SNF family helicase |
Gene: jk1361: SWF/SNF family helicase |
Gene: cur_0689: SWF/SNF family helicase |
Gene: cauri_1032: SWF/SNF family helicase |
Gene: CORAM0001_0624: SWF/SNF family helicase |
Gene: ckrop_1304: SWF/SNF family helicase |
SWF/SNF family helicase |
| sbcD |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -117 score = 4.63077 sequence = TTGAAGATATGTACGA Gene: cg1318: DNA repair exonuclease SbcD |
*
Corynebacterium efficiens YS-314 Site: position = -140 score = 4.0319 sequence = TGGAACAGTTGCGCGC Gene: CE1265: DNA repair exonuclease SbcD |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -72 score = 4.05565 sequence = TCGAAGACATCTACTA Gene: DIP1025: DNA repair exonuclease SbcD |
*
Corynebacterium jeikeium K411 Site: position = -122 score = 5.05684 sequence = TCGAACCTTTGTTCTA Gene: jk1360: DNA repair exonuclease SbcD |
Gene: cur_0690: DNA repair exonuclease SbcD |
Gene: cauri_1033: DNA repair exonuclease SbcD |
Gene: CORAM0001_0625: DNA repair exonuclease SbcD |
Gene: ckrop_1303: DNA repair exonuclease SbcD |
DNA repair exonuclease SbcD |
| sbcC |
Gene: cg1319: ATPase involved in DNA repair |
Gene: CE1266: ATPase involved in DNA repair |
Gene: DIP1026: ATPase involved in DNA repair |
Gene: jk1359: ATPase involved in DNA repair |
Gene: cur_0691: ATPase involved in DNA repair |
Gene: cauri_1034: ATPase involved in DNA repair |
Gene: CORAM0001_0626: ATPase involved in DNA repair |
Gene: ckrop_1302: ATPase involved in DNA repair |
ATPase involved in DNA repair |
| CRON 25. | |||||||||
| cg2381 |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -122 score = 5.05933 sequence = TCAAATATGTGTTCGA Gene: cg2381: Conserved hypothetical protein |
*
Corynebacterium efficiens YS-314 Site: position = -6 score = 5.06149 sequence = TAGAAAGTGTGTTCTA Gene: CE2064: Conserved hypothetical protein |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = 31 score = 4.75838 sequence = TCGAACAAACGTTCCA Gene: DIP1609: Conserved hypothetical protein |
*
Corynebacterium jeikeium K411 Site: position = -111 score = 5.54147 sequence = TGGAACATGTGTTCTA Gene: jk0739: Conserved hypothetical protein |
*
Corynebacterium urealyticum DSM 7109 Site: position = -88 score = 5.51374 sequence = TAGAACACGTGTTCGA Gene: cur_1216: Conserved hypothetical protein |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -145 score = 4.70051 sequence = TCGAACACCTGCTCTA Gene: cauri_1681: Conserved hypothetical protein |
*
Corynebacterium amycolatum SK46 Site: position = -123 score = 5.5175 sequence = TCGAACAGATGTGCGA Gene: CORAM0001_1116: Conserved hypothetical protein |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -179 score = 4.93789 sequence = TCGAATATAAGTTCGA Gene: ckrop_0735: Conserved hypothetical protein |
Conserved hypothetical protein |
| CRON 26. | |||||||||
| lexA |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -270 score = 4.0954 sequence = CCGTTCACATGTTCGA Site: position = -190 score = 4.37101 sequence = TCGAACACTCGTACCA Gene: cg2114: SOS-response repressor LexA |
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Corynebacterium efficiens YS-314 Site: position = -130 score = 4.37101 sequence = TCGAACACTCGTACCA Site: position = -209 score = 4.74667 sequence = TCGTTCACATGTTCGA Gene: CE1823: SOS-response repressor LexA |
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Corynebacterium diphtheriae NCTC 13129 Site: position = -268 score = 4.85373 sequence = TCGACAACATGTTCGA Gene: DIP1426: SOS-response repressor LexA |
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Corynebacterium jeikeium K411 Site: position = -164 score = 4.98634 sequence = TAGATCACGTGTTCTA Site: position = -126 score = 4.40372 sequence = TAGCACGCTTGTTCGA Site: position = -84 score = 4.57421 sequence = TCGAACACATATACTA Gene: jk1106: SOS-response repressor LexA |
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Corynebacterium urealyticum DSM 7109 Site: position = -103 score = 5.4388 sequence = TCGAACGGGTGTTCTA Site: position = -68 score = 4.25289 sequence = TAGCACGCACGTTCGA Gene: cur_0884: SOS-response repressor LexA |
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Corynebacterium aurimucosum ATCC 700975 Site: position = -124 score = 4.16543 sequence = TCGAACATTTTTTCCT Site: position = -204 score = 4.23471 sequence = TCGACCAACCGTTCGA Gene: cauri_1477: SOS-response repressor LexA |
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Corynebacterium amycolatum SK46 Site: position = -227 score = 4.40092 sequence = TCAAACGACTGTTCGA Gene: CORAM0001_0857: SOS-response repressor LexA |
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Corynebacterium kroppenstedtii DSM 44385 Site: position = -213 score = 3.95076 sequence = TCGAACATGTGCGATC Gene: ckrop_1088: SOS-response repressor LexA |
SOS-response repressor LexA |
| CRON 27. | |||||||||
| pdxS |
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Corynebacterium glutamicum ATCC 13032 Site: position = -76 score = 4.15136 sequence = TCAAAAAAGTGGTCTA Gene: cg0898: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
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Gene: DIP0227: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
Gene: jk1060: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
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Gene: cauri_0520: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
Gene: CORAM0001_2117: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
Gene: ckrop_1034: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
| pdxT |
Gene: cg0899: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
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Gene: DIP0228: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Gene: jk1058: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
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Gene: cauri_0521: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Gene: CORAM0001_2119: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Gene: ckrop_1033: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
| CRON 28. | |||||||||
| cg2683 |
*3
Corynebacterium glutamicum ATCC 13032 Site: position = -103 score = 4.40085 sequence = TTGAATAAGTGTTTGA Site: position = -72 score = 4.11393 sequence = TCGAAAGTGTGAGCGG Gene: cg1059: Conserved hypothetical protein Site: position = -69 score = 4.25592 sequence = TCGAAAATTTGATCGG Site: position = -121 score = 4.19838 sequence = TCGAACATGTGAGTGC Gene: cg2504: Conserved hypothetical protein Site: position = -58 score = 4.45853 sequence = TCGAACACGTGAGCGG Gene: cg2683: Conserved hypothetical protein |
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*2
Corynebacterium amycolatum SK46 Site: position = -89 score = 5.09177 sequence = TCGAATGGGTGTGCGA Gene: CORAM0001_0220: Conserved hypothetical protein Site: position = -134 score = 4.04717 sequence = TCGGAAAAAAGTTCGA Site: position = -91 score = 4.86618 sequence = TCGAATGGGTGTACGA Gene: CORAM0001_1381: Conserved hypothetical protein |
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Conserved hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |