Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Corynebacterium kroppenstedtii DSM 44385

Properties
Regulator type: Transcription factor
TF locus tag: ckrop_1088
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Corynebacteriaceae
Statistics of regulated genes:
- Genes 11
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 109 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -117
Score: 5.6
Sequence: TCGAAAATATGTTCGA
Locus tag: ckrop_1305
Name: helZ
Funciton: SNF2 family DNA/RNA helicase
Locus tag: ckrop_1304
Name: cg1317
Funciton: SWF/SNF family helicase
Locus tag: ckrop_1303
Name: sbcD
Funciton: DNA repair exonuclease SbcD
Locus tag: ckrop_1302
Name: sbcC
Funciton: ATPase involved in DNA repair
helZ
SNF2 family DNA/RNA helicase
cg1317
SWF/SNF family helicase
sbcD
DNA repair exonuclease SbcD
sbcC
ATPase involved in DNA repair

Position: -179
Score: 4.9
Sequence: TCGAATATAAGTTCGA
Locus tag: ckrop_0735
Name: cg2381
Funciton: Conserved hypothetical protein
cg2381
Conserved hypothetical protein

Position: -252
Score: 5.2
Sequence: TCGAACATATTTTCGA
Locus tag: ckrop_1307
Name: putP
Funciton: Sodium/proline symporter
putP
Sodium/proline symporter

Position: -245
Score: 4.5
Sequence: TCGAACATACGTTTGC
Locus tag: ckrop_1113
Name: recA
Funciton: Recombination protein RecA
Locus tag: ckrop_1111
Name: recX
Funciton: Recombination regulator RecX
recA
Recombination protein RecA
recX
Recombination regulator RecX

Position: -191
Score: 5
Sequence: TCGAACACGCGTACTA
Locus tag: ckrop_0333
Name: dnaE2
Funciton: Error-prone DNA polymerase
dnaE2
Error-prone DNA polymerase

Position: -52
Score: 4
Sequence: GGGATGAGATGTTCGA
Locus tag: ckrop_2122
Name: divS
Funciton: SOS-inducible cell-division suppressor
divS
SOS-inducible cell-division suppressor

Position: -213
Score: 4
Sequence: TCGAACATGTGCGATC
Locus tag: ckrop_1088
Name: lexA
Funciton: SOS-response repressor LexA
lexA
SOS-response repressor LexA
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD