Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sbcD gene

Properties
Regulog: LexA - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Actinobacteria
Built upon 109 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Corynebacterium amycolatum SK46
Position: -141
Score: 5.21766
Sequence: TCGAACACGCGTGCTA
Locus tag: CORAM0001_0623
Name: helZ
Funciton: SNF2 family DNA/RNA helicase
Locus tag: CORAM0001_0624
Name: cg1317
Funciton: SWF/SNF family helicase
Locus tag: CORAM0001_0625
Name: sbcD
Funciton: DNA repair exonuclease SbcD
Locus tag: CORAM0001_0626
Name: sbcC
Funciton: ATPase involved in DNA repair
helZ-cg1317-sbcD-sbcC -141 5.2 TCGAACACGCGTGCTA CORAM0001_0623
Corynebacterium diphtheriae NCTC 13129
Position: -72
Score: 4.05565
Sequence: TCGAAGACATCTACTA
Locus tag: DIP1025
Name: sbcD
Funciton: DNA repair exonuclease SbcD
Locus tag: DIP1026
Name: sbcC
Funciton: ATPase involved in DNA repair
sbcD-sbcC -72 4.1 TCGAAGACATCTACTA DIP1025
Corynebacterium efficiens YS-314
Position: -140
Score: 4.0319
Sequence: TGGAACAGTTGCGCGC
Locus tag: CE1265
Name: sbcD
Funciton: DNA repair exonuclease SbcD
Locus tag: CE1266
Name: sbcC
Funciton: ATPase involved in DNA repair
sbcD-sbcC -140 4 TGGAACAGTTGCGCGC CE1265
Corynebacterium glutamicum ATCC 13032
Position: -117
Score: 4.63077
Sequence: TTGAAGATATGTACGA
Locus tag: cg1318
Name: sbcD
Funciton: DNA repair exonuclease SbcD
Locus tag: cg1319
Name: sbcC
Funciton: ATPase involved in DNA repair
sbcD-sbcC -117 4.6 TTGAAGATATGTACGA cg1318
Corynebacterium jeikeium K411
Position: -122
Score: 5.05684
Sequence: TCGAACCTTTGTTCTA
Locus tag: jk1360
Name: sbcD
Funciton: DNA repair exonuclease SbcD
Locus tag: jk1359
Name: sbcC
Funciton: ATPase involved in DNA repair
sbcD-sbcC -122 5.1 TCGAACCTTTGTTCTA jk1360
Corynebacterium kroppenstedtii DSM 44385
Position: -117
Score: 5.6074
Sequence: TCGAAAATATGTTCGA
Locus tag: ckrop_1305
Name: helZ
Funciton: SNF2 family DNA/RNA helicase
Locus tag: ckrop_1304
Name: cg1317
Funciton: SWF/SNF family helicase
Locus tag: ckrop_1303
Name: sbcD
Funciton: DNA repair exonuclease SbcD
Locus tag: ckrop_1302
Name: sbcC
Funciton: ATPase involved in DNA repair
helZ-cg1317-sbcD-sbcC -117 5.6 TCGAAAATATGTTCGA ckrop_1305