Regulon of LexA in Corynebacterium glutamicum ATCC 13032
| Regulator type: | Transcription factor |
| TF locus tag: | cg2114 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Corynebacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 39 |
| - Operons | 30 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -40
Score: 5.5 Sequence: TGGAACAGGTGTTCGA
Locus tag: cg0713
Name: cg0713 Funciton: Conserved hypothetical protein
Locus tag: cg0714
Name: dinP Funciton: DNA polymerase IV |
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cg0713
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Conserved hypothetical protein
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dinP
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DNA polymerase IV
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Position: -88
Score: 4.9 Sequence: TCGAATAACTGTTCGA
Locus tag: cg2733
Name: cg2733 Funciton: HNH nuclease |
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cg2733
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HNH nuclease
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Position: -48
Score: 3.5 Sequence: TCGAACACCGTTTCTC
Locus tag: cg2950
Name: radA Funciton: DNA repair protein RadA |
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radA
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DNA repair protein RadA
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Position: -58
Score: 4.5 Sequence: TCGAACACGTGAGCGG
Locus tag: cg2683
Name: cg2683 Funciton: Conserved hypothetical protein |
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cg2683
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Conserved hypothetical protein
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Position: -121
Score: 4.2 Sequence: TCGAACATGTGAGTGC
Position: -69
Score: 4.3 Sequence: TCGAAAATTTGATCGG
Locus tag: cg2504
Name: cg2683 Funciton: Conserved hypothetical protein |
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cg2683
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Conserved hypothetical protein
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Position: -103
Score: 4.4 Sequence: TTGAATAAGTGTTTGA
Position: -72
Score: 4.1 Sequence: TCGAAAGTGTGAGCGG
Locus tag: cg1059
Name: cg2683 Funciton: Conserved hypothetical protein |
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cg2683
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Conserved hypothetical protein
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Position: -87
Score: 4 Sequence: TCGAAAGTATTTCCGA
Locus tag: cg0841
Name: cg0841 Funciton: Hypothetical protein |
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cg0841
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Hypothetical protein
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Position: -76
Score: 4.2 Sequence: TCAAAAAAGTGGTCTA
Locus tag: cg0898
Name: pdxS Funciton: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
Locus tag: cg0899
Name: pdxT Funciton: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
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pdxS
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Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
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pdxT
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Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
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Position: -201
Score: 5.3 Sequence: TGGAAAATATGTTCGA
Locus tag: cg0470
Name: cg0470 Funciton: Hypothetical protein
Locus tag: cg0471
Name: cg0471 Funciton: Hypothetical protein |
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cg0470
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Hypothetical protein
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cg0471
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Hypothetical protein
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Position: -30
Score: 3.8 Sequence: ATGAAAATTTGTTTGA
Locus tag: cg1080
Name: cg1080 Funciton: Predicted multicopper oxidase |
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cg1080
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Predicted multicopper oxidase
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Position: -102
Score: 4.1 Sequence: TAGCACATATTTTCTA
Locus tag: cg2026
Name: cg2026 Funciton: Hypothetical protein |
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cg2026
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Hypothetical protein
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Position: -37
Score: 4.7 Sequence: TAGAACATATGTACCA
Locus tag: cg0875
Name: cg0875 Funciton: Conserved hypothetical protein |
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cg0875
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Conserved hypothetical protein
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Position: -240
Score: 5 Sequence: TCGAACAGTTGTGCGT
Locus tag: cg2141
Name: recA Funciton: Recombination protein RecA
Locus tag: cg2140
Name: recX Funciton: Recombination regulator RecX |
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recA
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Recombination protein RecA
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recX
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Recombination regulator RecX
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Position: -79
Score: 5.1 Sequence: TCGATAATATGTTCTA
Locus tag: cg1288
Name: blt Funciton: Predicted permease
Locus tag: cg1289
Name: cg1289 Funciton: Predicted multidrug resistance protein |
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blt
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Predicted permease
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cg1289
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Predicted multidrug resistance protein
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Position: -19
Score: 5.1 Sequence: TGGAAAATTTGTTCTA
Locus tag: cg0738
Name: dnaE2 Funciton: Error-prone DNA polymerase |
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dnaE2
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Error-prone DNA polymerase
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Position: -297
Score: 4.3 Sequence: TCGCACATTTTTTCTA
Locus tag: cg1884
Name: cg1884 Funciton: Conserved hypothetical protein |
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cg1884
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Conserved hypothetical protein
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Position: -165
Score: 4.6 Sequence: TGGTACGAGTGTTCGA
Position: -85
Score: 4.3 Sequence: TCGAACATGTGAACGG
Locus tag: cg2113
Name: divS Funciton: SOS-inducible cell-division suppressor |
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divS
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SOS-inducible cell-division suppressor
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Position: -100
Score: 3.7 Sequence: TCAAGCACCCGTTCGA
Locus tag: cg0742
Name: cg0742 Funciton: Hypothetical protein |
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cg0742
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Hypothetical protein
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Position: -122
Score: 5.1 Sequence: TCAAATATGTGTTCGA
Locus tag: cg2381
Name: cg2381 Funciton: Conserved hypothetical protein |
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cg2381
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Conserved hypothetical protein
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Position: -22
Score: 4 Sequence: CCGATCAAATGTTTGA
Locus tag: cg2034
Name: cg2034 Funciton: Hypothetical protein |
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cg2034
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Hypothetical protein
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Position: -62
Score: 3.7 Sequence: ACACAAACGTGTTCGA
Locus tag: cg0834
Name: cg0834 Funciton: Predicted ABC transporter, substrate binding protein |
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cg0834
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Predicted ABC transporter, substrate binding protein
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Position: -259
Score: 4.1 Sequence: TCGTAACCTTGTGCGA
Locus tag: cg1314
Name: putP Funciton: Sodium/proline symporter |
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putP
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Sodium/proline symporter
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Position: -63
Score: 4.5 Sequence: TTGAACAAATGTTCGG
Locus tag: cg1427
Name: null Funciton: hypothetical protein
Locus tag: cg1429
Name: Cg1429 Funciton: conserved hypothetical protein |
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hypothetical protein
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Cg1429
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conserved hypothetical protein
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Position: -68
Score: 4.1 Sequence: TAGAAAACTTGGACGA
Locus tag: cg2158
Name: ftsK Funciton: cell division protein, required for cell division and chromosomepartitioning |
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ftsK
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cell division protein, required for cell division and chromosomepartitioning
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Position: -117
Score: 4.6 Sequence: TTGAAGATATGTACGA
Locus tag: cg1318
Name: sbcD Funciton: DNA repair exonuclease SbcD
Locus tag: cg1319
Name: sbcC Funciton: ATPase involved in DNA repair |
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sbcD
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DNA repair exonuclease SbcD
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sbcC
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ATPase involved in DNA repair
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Position: -270
Score: 4.1 Sequence: CCGTTCACATGTTCGA
Position: -190
Score: 4.4 Sequence: TCGAACACTCGTACCA
Locus tag: cg2114
Name: lexA Funciton: SOS-response repressor LexA |
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lexA
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SOS-response repressor LexA
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Position: -66
Score: 4.5 Sequence: TCGATGCTATGTTCGA
Locus tag: cg1560
Name: uvrA Funciton: Excinuclease ABC, subunit A |
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uvrA
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Excinuclease ABC, subunit A
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Position: -68
Score: 5.3 Sequence: TCGAATAAATGTTCGA
Locus tag: cg1255
Name: cg1255 Funciton: HNH endonuclease |
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cg1255
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HNH endonuclease
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Position: -49
Score: 4.2 Sequence: TAGAAAAAACGTTCGC
Locus tag: cg1602
Name: recN Funciton: DNA repair protein RecN |
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recN
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DNA repair protein RecN
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Position: -104
Score: 4.2 Sequence: TCGCAATTGTGTGCTA
Locus tag: cg1871
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: cg1870
Name: ruvA Funciton: Holliday junction DNA helicase (EC 3.6.4.12) motor protein
Locus tag: cg1869
Name: ruvB Funciton: holliday junction DNA helicase RuvB (EC 3.6.4.12) |
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ruvC
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Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
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ruvA
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Holliday junction DNA helicase (EC 3.6.4.12) motor protein
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ruvB
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holliday junction DNA helicase RuvB (EC 3.6.4.12)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |