Regulog FasR - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid biosynthesis |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By TF family - TetR
- By pathway - Fatty acid biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium amycolatum SK46 | 2 | 2 |
| Corynebacterium aurimucosum ATCC 700975 | 2 | 2 |
| Corynebacterium diphtheriae NCTC 13129 | 2 | 2 |
| Corynebacterium efficiens YS-314 | 2 | 2 |
| Corynebacterium glutamicum ATCC 13032 | 4 | 4 |
| Corynebacterium jeikeium K411 | ||
| Corynebacterium kroppenstedtii DSM 44385 | ||
| Corynebacterium urealyticum DSM 7109 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| accD1 |
*
Corynebacterium amycolatum SK46 Site: position = -2 score = 5.70866 sequence = ACATGACTATTTCCTCACGT Gene: CORAM0001_2207: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -2 score = 5.65765 sequence = ACATGACTATTTCCTCACAT Gene: cauri_0563: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -2 score = 5.50434 sequence = ACATGACCATTTCCTCATCT Gene: DIP0660: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) |
*
Corynebacterium efficiens YS-314 Site: position = -2 score = 5.25607 sequence = ACATGACCATTTCCTCACCT Gene: CE0738: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -2 score = 5.25607 sequence = ACATGACCATTTCCTCACCT Gene: cg0812: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) |
|
|
|
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) |
| CRON 2. | |||||||||
| fasA |
|
Gene: cauri_0280: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ... |
|
Gene: CE0913: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ... |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -105 score = 5.70294 sequence = ACATGAGGGTTTAGTCATCT Gene: cg0957: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ... |
|
|
|
[Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ... |
| CRON 3. | |||||||||
| fasB |
*
Corynebacterium amycolatum SK46 Site: position = -102 score = 5.84073 sequence = ACATGATGGATTCCTCATGA Gene: CORAM0001_1183: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ... |
Gene: cauri_2079: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ... |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -101 score = 5.9466 sequence = AGATGACAGTTTCCTCATAT Gene: DIP1846: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ... |
*
Corynebacterium efficiens YS-314 Site: position = -165 score = 5.87696 sequence = AGATGACGTTTTCCTCATGA Gene: CE2392: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ... |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -168 score = 5.87696 sequence = AGATGACGTTTTCCTCATGA Gene: cg2743: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ... |
|
|
|
[Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ... |
| CRON 4. | |||||||||
| accBC |
Gene: CORAM0001_1963: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -78 score = 5.67725 sequence = ATGTGAAGGTATCCTCATGT Gene: cauri_0555: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase |
Gene: DIP0649: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase |
Gene: CE0719: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -121 score = 5.43558 sequence = ATATGAGTAAGTCCTCATAT Gene: cg0802: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase |
Gene: jk1669: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase |
Gene: ckrop_1542: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase |
Gene: cur_0446: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase |
Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |