Regulog FasR - Corynebacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid biosynthesis
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 12 sites [see more]

Member of regulog collections

By taxonomy - Corynebacteriaceae
By TF family - TetR
By pathway - Fatty acid biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Corynebacterium amycolatum SK46	2	2
Corynebacterium aurimucosum ATCC 700975	2	2
Corynebacterium diphtheriae NCTC 13129	2	2
Corynebacterium efficiens YS-314	2	2
Corynebacterium glutamicum ATCC 13032	4	4
Corynebacterium jeikeium K411
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium urealyticum DSM 7109

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
accD1	* Corynebacterium amycolatum SK46 Site: position = -2 score = 5.70866 sequence = ACATGACTATTTCCTCACGT Gene: CORAM0001_2207: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	* Corynebacterium aurimucosum ATCC 700975 Site: position = -2 score = 5.65765 sequence = ACATGACTATTTCCTCACAT Gene: cauri_0563: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	* Corynebacterium diphtheriae NCTC 13129 Site: position = -2 score = 5.50434 sequence = ACATGACCATTTCCTCATCT Gene: DIP0660: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	* Corynebacterium efficiens YS-314 Site: position = -2 score = 5.25607 sequence = ACATGACCATTTCCTCACCT Gene: CE0738: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	* Corynebacterium glutamicum ATCC 13032 Site: position = -2 score = 5.25607 sequence = ACATGACCATTTCCTCACCT Gene: cg0812: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)

CRON 2.
fasA	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_0280: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ...	Corynebacterium diphtheriae NCTC 13129	Corynebacterium efficiens YS-314 Gene: CE0913: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ...	* Corynebacterium glutamicum ATCC 13032 Site: position = -105 score = 5.70294 sequence = ACATGAGGGTTTAGTCATCT Gene: cg0957: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ...	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109	[Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ...

CRON 3.
fasB	* Corynebacterium amycolatum SK46 Site: position = -102 score = 5.84073 sequence = ACATGATGGATTCCTCATGA Gene: CORAM0001_1183: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ...	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_2079: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ...	* Corynebacterium diphtheriae NCTC 13129 Site: position = -101 score = 5.9466 sequence = AGATGACAGTTTCCTCATAT Gene: DIP1846: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ...	* Corynebacterium efficiens YS-314 Site: position = -165 score = 5.87696 sequence = AGATGACGTTTTCCTCATGA Gene: CE2392: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ...	* Corynebacterium glutamicum ATCC 13032 Site: position = -168 score = 5.87696 sequence = AGATGACGTTTTCCTCATGA Gene: cg2743: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ...	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109	[Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) / [Acyl-carrier-protein] malonyl transferase of ...

CRON 4.
accBC	Corynebacterium amycolatum SK46 Gene: CORAM0001_1963: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase	* Corynebacterium aurimucosum ATCC 700975 Site: position = -78 score = 5.67725 sequence = ATGTGAAGGTATCCTCATGT Gene: cauri_0555: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Corynebacterium diphtheriae NCTC 13129 Gene: DIP0649: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Corynebacterium efficiens YS-314 Gene: CE0719: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase	* Corynebacterium glutamicum ATCC 13032 Site: position = -121 score = 5.43558 sequence = ATATGAGTAAGTCCTCATAT Gene: cg0802: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Corynebacterium jeikeium K411 Gene: jk1669: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_1542: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Corynebacterium urealyticum DSM 7109 Gene: cur_0446: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) / Biotin carboxyl carrier protein of acetyl-CoA carboxylase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog FasR - Corynebacteriaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --