Regulog CadR - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Cadmium resistance |
| Effector: | Cadmium, ion (Cd2+) |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By TF family - ArsR
- By effector - Cadmium, ion (Cd2+)
- By pathway - Cadmium resistance
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium amycolatum SK46 | 2 | 1 |
| Corynebacterium aurimucosum ATCC 700975 | 2 | 1 |
| Corynebacterium diphtheriae NCTC 13129 | ||
| Corynebacterium efficiens YS-314 | 2 | 1 |
| Corynebacterium glutamicum ATCC 13032 | 2 | 1 |
| Corynebacterium jeikeium K411 | 2 | 1 |
| Corynebacterium kroppenstedtii DSM 44385 | 2 | 1 |
| Corynebacterium urealyticum DSM 7109 | 2 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| cadR |
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Corynebacterium amycolatum SK46 Site: position = -27 score = 5.48784 sequence = TTCAGCAATTGCTGTA Site: position = -8 score = 5.95555 sequence = TTCAGCACATGCTGAC Site: position = -46 score = 4.70732 sequence = TTCAGCGCGCGTTGAA Gene: CORAM0001_0475: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -8 score = 5.66791 sequence = TTCAGTACATGCTGAC Site: position = -46 score = 4.53688 sequence = TTCAGTGCATTTTGAA Site: position = -27 score = 5.33251 sequence = TTCAGCGCACGTTGTA Gene: cauri_2487: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family |
|
*2
Corynebacterium efficiens YS-314 Gene: CE3P026: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family Site: position = 37 score = 5.12509 sequence = GTCAGCACCTGGTGTA Site: position = 55 score = 4.98489 sequence = GTCAGCATATGCTGAC Gene: CE0009: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family |
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Corynebacterium glutamicum ATCC 13032 Site: position = -27 score = 5.30992 sequence = TTCAGCAACAGCTGTA Site: position = -8 score = 5.75528 sequence = TTCAGCGCATGCTGAC Gene: cg1032: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family |
*
Corynebacterium jeikeium K411 Site: position = -8 score = 5.95555 sequence = TTCAGCACATGCTGAC Site: position = -46 score = 4.82453 sequence = TTCAGCGCATTTTGAA Site: position = -27 score = 5.53278 sequence = TTCAGCACACGATGTA Gene: jk1437: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family |
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Corynebacterium kroppenstedtii DSM 44385 Site: position = -27 score = 5.47896 sequence = TTCAGCAGCCGCTGTA Site: position = -8 score = 4.82721 sequence = TCCAGTGCATGCTGAC Gene: ckrop_1433: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family |
*
Corynebacterium urealyticum DSM 7109 Site: position = -46 score = 4.5976 sequence = TTCAGTGCGTGTTGAA Site: position = -27 score = 4.93922 sequence = TTCAGTGGATACTGTA Site: position = -8 score = 5.95555 sequence = TTCAGCACATGCTGAC Gene: cur_0636: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family |
Predicted cadmium resistance transcriptional regulator CdrR, ArsR family |
| cadA |
Gene: CORAM0001_0474: Predicted cadmium-transporting ATPase |
Gene: cauri_2488: Predicted cadmium-transporting ATPase |
|
2
Corynebacterium efficiens YS-314 Gene: CE3P027: Predicted cadmium-transporting ATPase Gene: CE0010: Predicted cadmium-transporting ATPase |
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Gene: jk1438: Predicted cadmium-transporting ATPase |
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Gene: cur_0635: Predicted cadmium-transporting ATPase |
Predicted cadmium-transporting ATPase |
| cadD |
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Gene: cg1033: Predicted permease, cadmium resistance protein |
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Gene: ckrop_1434: Predicted permease, cadmium resistance protein |
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Predicted permease, cadmium resistance protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |