Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of AmtR in Corynebacterium efficiens YS-314

Properties
Regulator type: Transcription factor
TF locus tag: CE0939
Regulator family: TetR
Regulation mode: repressor
Biological process: Nitrogen metabolism
Effector: GlnK-AMP, signal transduction protein
Regulog: AmtR - Corynebacteriaceae
Statistics of regulated genes:
- Genes 29
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 42 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -107
Score: 5.4
Sequence: TTTTCCTATAGGTTGATCGAAAAT
Position: -40
Score: 5.1
Sequence: ATTATCGAATGATTAATAGAAACC
Locus tag: CE0158
Name: gltB
Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: CE0159
Name: gltD
Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
CE0158
gltB
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
CE0159
gltD
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
Position: -113
Score: 5.1
Sequence: GGTTTCTATTAATCATTCGATAAT
Position: -46
Score: 5.7
Sequence: ATTTTCGATCAACCTATAGGAAAA
Locus tag: CE0157
Name: hkm
Funciton: Predicted sensor histidine kinase of two-component system
CE0157
hkm
Predicted sensor histidine kinase of two-component system
Position: -110
Score: 4.9
Sequence: TTTACCTATTGAGCTATTGATAAA
Locus tag: CE1844
Name: gluA
Funciton: Glutamate ABC transporter, ATP-binding protein
Locus tag: CE1845
Name: gluB
Funciton: Glutamate ABC transporter, substrate-binding protein
Locus tag: CE1846
Name: gluC
Funciton: Glutamate ABC transporter, permease protein 1
Locus tag: CE1847
Name: gluD
Funciton: Glutamate ABC transporter, permease protein 2
CE1844
gluA
Glutamate ABC transporter, ATP-binding protein
CE1845
gluB
Glutamate ABC transporter, substrate-binding protein
CE1846
gluC
Glutamate ABC transporter, permease protein 1
CE1847
gluD
Glutamate ABC transporter, permease protein 2
Position: -99
Score: 5.3
Sequence: TTAAACTATTGACCGATAGAAACA
Position: -65
Score: 5.1
Sequence: GTTATCTGTTATGCAATAGAAAAT
Locus tag: CE1701
Name: amtA
Funciton: Ammonium transporter
Locus tag: CE1700
Name: ocd
Funciton: Ornithine cyclodeaminase (EC 4.3.1.12)
Locus tag: CE1699
Name: soxA
Funciton: Sarcosine oxidase
CE1701
amtA
Ammonium transporter
CE1700
ocd
Ornithine cyclodeaminase (EC 4.3.1.12)
CE1699
soxA
Sarcosine oxidase
Position: -117
Score: 5.9
Sequence: ATTACCTATCGATCGATAGATAAA
Locus tag: CE0711
Name: uctT
Funciton: Urea carboxylase-related transporter, Amino acid permease family
Locus tag: CE0710
Name: ucaB
Funciton: Allophanate hydrolase (EC 3.5.1.54)
CE0711
uctT
Urea carboxylase-related transporter, Amino acid permease family
CE0710
ucaB
Allophanate hydrolase (EC 3.5.1.54)
Position: -72
Score: 5.3
Sequence: TAATTCTATAGATCAATAGAATTA
Position: -27
Score: 5.7
Sequence: AGTTTCTATCACTCAATAGAAAAG
Locus tag: CE2850
Name: crnT
Funciton: Creatinine transporter
CE2850
crnT
Creatinine transporter
Position: -25
Score: 4.7
Sequence: TCTAACTATTGACTTATAGTTATT
Locus tag: CE0993
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: CE0994
Name: ureB
Funciton: Urease beta subunit (EC 3.5.1.5)
Locus tag: CE0995
Name: ureC
Funciton: Urease alpha subunit (EC 3.5.1.5)
Locus tag: CE0996
Name: ureE
Funciton: Urease accessory protein UreE
Locus tag: CE0997
Name: ureF
Funciton: Urease accessory protein UreF
Locus tag: CE0998
Name: ureG
Funciton: Urease accessory protein UreG
Locus tag: CE0999
Name: ureD
Funciton: Urease accessory protein UreD
CE0993
ureA
Urease, gamma subunit (EC 3.5.1.5)
CE0994
ureB
Urease beta subunit (EC 3.5.1.5)
CE0995
ureC
Urease alpha subunit (EC 3.5.1.5)
CE0996
ureE
Urease accessory protein UreE
CE0997
ureF
Urease accessory protein UreF
CE0998
ureG
Urease accessory protein UreG
CE0999
ureD
Urease accessory protein UreD
Position: -102
Score: 5.6
Sequence: ATTATCGGTCGATCTATAGATAAA
Locus tag: CE0715
Name: amt1
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: CE0714
Name: amt2
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: CE0713
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6)
CE0715
amt1
Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
CE0714
amt2
Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
CE0713
ucaA
Urea carboxylase (EC 6.3.4.6)
Position: -147
Score: 5.5
Sequence: AGTTTTGATAGATCGACAGATAAT
Locus tag: CE2104
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
CE2104
glnA
Glutamine synthetase type I (EC 6.3.1.2)
Position: -47
Score: 4.6
Sequence: TAAAACTATTAACCGTTAGGTATA
Locus tag: CE1982
Name: gdh
Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
CE1982
gdh
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Position: -168
Score: 5.3
Sequence: GAATTCTATCGACCTATCGAAAGT
Locus tag: CE1968
Name: amtB
Funciton: Ammonium transporter
CE1968
amtB
Ammonium transporter
Position: -65
Score: 5.6
Sequence: ATTACCTATAGCTTTATAGAAACA
Position: -39
Score: 5.1
Sequence: TAAACCTGTCGATCTATAGAAATC
Locus tag: CE1000
Name: urtA
Funciton: Urea ABC transporter, substrate-binding protein
Locus tag: CE1001
Name: urtB
Funciton: Urea ABC transporter, permease protein 1
Locus tag: CE1003
Name: urtC
Funciton: Urea ABC transporter, permease protein 2
CE1000
urtA
Urea ABC transporter, substrate-binding protein
CE1001
urtB
Urea ABC transporter, permease protein 1
CE1003
urtC
Urea ABC transporter, permease protein 2
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