Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PaaR in Corynebacterium efficiens YS-314

Properties
Regulator type: Transcription factor
TF locus tag: CE0665
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Regulog: PaaR - Corynebacteriaceae
Statistics of regulated genes:
- Genes 18
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 14 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -132
Score: 4.6
Sequence: ATATACTGACCGGGCGGTCGGT
Position: -128
Score: 6.4
Sequence: ACTGACCGGGCGGTCGGTTAGT
Locus tag: CE0667
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: CE0668
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: CE0669
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: CE0670
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: CE0671
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: CE0672
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: CE0673
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: CE0674
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: CE0675
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
CE0667
paaA
Phenylacetate-CoA oxygenase, PaaA subunit
CE0668
paaB
Phenylacetate-CoA oxygenase, PaaB subunit
CE0669
paaC
Phenylacetate-CoA oxygenase, PaaC subunit
CE0670
paaD
Phenylacetate-CoA oxygenase, PaaD subunit
CE0671
paaE
Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
CE0672
paaG
Enoyl-CoA hydratase (EC 4.2.1.17)
CE0673
paaJ
Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
CE0674
paaF
Enoyl-CoA hydratase (EC 4.2.1.17)
CE0675
paaH
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Position: -180
Score: 5
Sequence: ACCAACTTACCGACTGGTCAGT
Position: -176
Score: 5.1
Sequence: ACTTACCGACTGGTCAGTTGGT
Position: -172
Score: 4.6
Sequence: ACCGACTGGTCAGTTGGTAAAT
Locus tag: CE0663
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: CE0662
Name: paaT
Funciton: predicted phylacetic acid transporter
CE0663
paaK
Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
CE0662
paaT
predicted phylacetic acid transporter
Position: -47
Score: 6.6
Sequence: AGTTACCGAACGGCCGGTCAGT
Position: -43
Score: 5.2
Sequence: ACCGAACGGCCGGTCAGTAATT
Locus tag: CE0676
Name: paaY
Funciton: hypothetical protein
CE0676
paaY
hypothetical protein
Position: -23
Score: 6
Sequence: AACAACCGCACGATCGGTATGT
Locus tag: CE1635
Name: hisE
Funciton: Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)
Locus tag: CE1634
Name: hisG
Funciton: ATP phosphoribosyltransferase (EC 2.4.2.17)
Locus tag: CE1633
Name: aspA
Funciton: Aspartate ammonia-lyase (EC 4.3.1.1)
CE1635
hisE
Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)
CE1634
hisG
ATP phosphoribosyltransferase (EC 2.4.2.17)
CE1633
aspA
Aspartate ammonia-lyase (EC 4.3.1.1)
Position: -58
Score: 5.4
Sequence: TACTACCGTCCATTCGGTAAGT
Locus tag: CE0666
Name: paaI
Funciton: Phenylacetic acid degradation protein PaaI, thioesterase
CE0666
paaI
Phenylacetic acid degradation protein PaaI, thioesterase
Position: -125
Score: 5.1
Sequence: AATTACTGACCGGCCGTTCGGT
Position: -121
Score: 6
Sequence: ACTGACCGGCCGTTCGGTAACT
Locus tag: CE0677
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
CE0677
paaZ
Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Position: -599
Score: 6.2
Sequence: ACTAACCGACCGCCCGGTCAGT
Position: -595
Score: 5.2
Sequence: ACCGACCGCCCGGTCAGTATAT
Position: 38
Score: 4.7
Sequence: ACTTACCGAATGGACGGTAGTA
Locus tag: CE0665
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
CE0665
paaR
Transcriptional regulator of phenylacetic acid degradation, TetR family
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