Collection of regulogs for PaaR transcription factor
Genomes | 114 |
TF regulogs | 15 |
TF regulons | 75 |
TF binding sites | 328 |
PaaR is a repressor belonging to the TetR family. PaaR regulates the phenylacetic acid utilization genes and was experimentally analyzed in Burkholderia cenocepacia and Thermus thermophilus. For all characterized paa genes, phenylacetic acid-CoA inhibits binding of the PaaR repressor to the corresponding target operators. We used a comparative genomics approach to reconstruct transcriptional regulons controlled by PaaR orthologs in diverse lineages of Bacteria [22685150].
Phylum | Regulog | TF regulons (studied genomes) | TFBSs | Logo |
---|---|---|---|---|
Actinobacteria | PaaR - Actinobacteria | 17 (17) | 85 | ![]() |
Actinobacteria | PaaR - Corynebacteriaceae | 1 (8) | 14 | ![]() |
Actinobacteria | PaaR - Frankineae/Propionibacterineae/Pseudonocardiaceae | 4 (9) | 14 | ![]() |
Actinobacteria | PaaR - Micrococcineae | 6 (14) | 38 | ![]() |
Actinobacteria | PaaR - Mycobacteriaceae | 1 (9) | 8 | ![]() |
Actinobacteria | PaaR - Nocardiaceae | 4 (4) | 22 | ![]() |
Actinobacteria | PaaR - Streptomycetaceae | 4 (4) | 24 | ![]() |
Alphaproteobacteria | PaaR - Rhizobiales | 3 (15) | 14 | ![]() |
Alphaproteobacteria | PaaR - Rhodobacterales | 5 (15) | 13 | ![]() |
Bacteroidetes | PaaR - Flavobacteria | 6 (6) | 8 | ![]() |
Betaproteobacteria | PaaR - Burkholderia | 8 (8) | 27 | ![]() |
Betaproteobacteria | PaaR - Comamonadaceae | 5 (11) | 13 | ![]() |
Betaproteobacteria | PaaR - Ralstonia | 6 (6) | 18 | ![]() |
Deinococcus-Thermus | PaaR - Deinococcus-Thermus | 2 (5) | 4 | ![]() |
Deinococcus-Thermus | PaaR2 - Deinococcus-Thermus | 3 (5) | 26 | ![]() |