Profile of regulator PaaR in Burkholderia
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Phenylacetic acid degradation |
| Effector: |
Phenylacetyl-CoA |
| Regulog: |
PaaR - Burkholderia |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Burkholderia pseudomallei K96243
|
|
BPSL3041 |
paaZ |
-64 |
6.4 |
TCCGACCAACCGGTCGGTTAAT |
|
BPSL3230 |
paaA |
-62 |
7.1 |
ATTAACCGACCGGTCGGTTGGT |
|
BPSL3040 |
paaG |
-70 |
6.6 |
ATTAACCGACCGGTTGGTCGGA |
|
Burkholderia mallei ATCC 23344
|
|
BMA2573 |
paaA |
-62 |
7.1 |
ATTAACCGACCGGTCGGTTGGT |
|
BMAA0543 |
paaZ |
-64 |
6 |
TCCGACTAACCGGTCGGTTAAT |
|
BMAA0544 |
paaG |
-88 |
6.1 |
ATTAACCGACCGGTTAGTCGGA |
|
Burkholderia sp. 383
|
|
Bcep18194_A3630 |
paaZ |
-63 |
6.4 |
TCCGACCAACCGGTCGGTTAAT |
|
Bcep18194_B1317 |
paaH |
-60 |
6.3 |
ATATACCGACCGGTCGGTTTAT |
|
Bcep18194_A3429 |
paaA |
-61 |
7.1 |
ATTAACCGACCGGTCGGTTGGT |
|
Bcep18194_A3631 |
paaG |
-88 |
6.6 |
ATTAACCGACCGGTTGGTCGGA |
|
Burkholderia cepacia AMMD
|
|
Bamb_0448 |
paaZ |
-63 |
6.4 |
TCCGACCAACCGGTCGGTTAAT |
|
Bamb_0449 |
paaG |
-88 |
6.6 |
ATTAACCGACCGGTTGGTCGGA |
|
Bamb_3960 |
paaH |
-61 |
6.6 |
ATCTACCGACCGGTCGGTTTAT |
|
Bamb_0249 |
paaA |
-62 |
7.1 |
ATTAACCGACCGGTCGGTTGGT |
|
Burkholderia glumae BGR1
|
|
bglu_1g02410 |
paaA |
-62 |
6.8 |
ATTAACCGACCGGACGGTTGGT |
|
bglu_1g04490 |
paaZ |
-70 |
6.2 |
GCCGACCAACCGGTCGGTTAAT |
|
bglu_1g04500 |
paaG |
-87 |
6.5 |
ATTAACCGACCGGTTGGTCGGC |
|
Burkholderia vietnamiensis G4
|
|
Bcep1808_0520 |
paaZ |
-63 |
6.4 |
TCCGACCAACCGGTCGGTTAAT |
|
Bcep1808_5069 |
paaH |
-61 |
6.6 |
ATCTACCGACCGGTCGGTTTAT |
|
Bcep1808_0521 |
paaG |
-88 |
6.6 |
ATTAACCGACCGGTTGGTCGGA |
|
Bcep1808_0312 |
paaA |
-62 |
7.1 |
ATTAACCGACCGGTCGGTTGGT |
|
Burkholderia xenovorans LB400
|
|
Bxe_A0470 |
paaZ |
-66 |
6.2 |
CCCAACCAACCGGTCGGTCAAT |
|
Bxe_A0471 |
paaG |
-93 |
6.5 |
ATTGACCGACCGGTTGGTTGGG |
|
Bxe_A0295 |
paaA |
-65 |
7.1 |
ATTAACCGACCGGTCGGTTGGT |
|
Burkholderia phymatum STM815
|
|
Bphy_2689 |
paaZ |
-68 |
6.6 |
ACCAACCAACCGGTCGGTCAAT |
|
Bphy_2688 |
paaG |
-90 |
6.9 |
ATTGACCGACCGGTTGGTTGGT |
|
Bphy_2857 |
paaA |
-66 |
6.8 |
ATTAACCGACCGGACGGTTGGT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
