Regulog PaaR - Micrococcineae

Properties
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 38 sites [see more]

Member of regulog collections

By taxonomy - Micrococcineae
By trascription factor - PaaR
By TF family - TetR
By effector - Phenylacetyl-CoA
By pathway - Phenylacetic acid degradation

Statistics of regulated genes
Genome	Genes	Operons
Arthrobacter aurescens TC1	13	5
Arthrobacter chlorophenolicus A6	14	7
Arthrobacter sp. FB24	15	7
Beutenbergia cavernae DSM 12333
Brachybacterium faecium DSM 4810
Brevibacterium linens BL2	14	4
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Janibacter sp. HTCC2649
Jonesia denitrificans DSM 20603
Kocuria rhizophila DC2201	11	5
Kytococcus sedentarius DSM 20547
Leifsonia xyli subsp. xyli str. CTCB07
Renibacterium salmoninarum ATCC 33209	12	3
Tropheryma whipplei str. Twist

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
paaA	* Arthrobacter aurescens TC1 Site: position = -36 score = 5.5853 sequence = TCTGAACGAACGGTCGGTAATT Gene: AAur_3226: Phenylacetate-CoA oxygenase, PaaA subunit	* Arthrobacter chlorophenolicus A6 Site: position = -64 score = 5.48047 sequence = CCTGAACGAACGGTCGGTAAAT Gene: Achl_2964: Phenylacetate-CoA oxygenase, PaaA subunit	* Arthrobacter sp. FB24 Site: position = -49 score = 5.56542 sequence = CCTGAACGAACGGTCGGTAATT Gene: Arth_3218: Phenylacetate-CoA oxygenase, PaaA subunit	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	* Brevibacterium linens BL2 Site: position = -101 score = 4.20209 sequence = ACAGAACAAATGGTCAGTAAAT Gene: BlinB01000722: Phenylacetate-CoA oxygenase, PaaA subunit	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	* Kocuria rhizophila DC2201 Site: position = -210 score = 5.01457 sequence = ATTTTCAGAACGATCGGTCAGT Site: position = -67 score = 4.80947 sequence = TCTGAACGAGCGGTCAGTTATT Gene: KRH_02150: Phenylacetate-CoA oxygenase, PaaA subunit	Kytococcus sedentarius DSM 20547 Gene: Ksed_09290: Phenylacetate-CoA oxygenase, PaaA subunit	Leifsonia xyli subsp. xyli str. CTCB07	* Renibacterium salmoninarum ATCC 33209 Site: position = -66 score = 4.9379 sequence = ATATACTGAACGAACGGTCAGT Site: position = -62 score = 5.38967 sequence = ACTGAACGAACGGTCAGTAATT Gene: RSal33209_2662: Phenylacetate-CoA oxygenase, PaaA subunit	Tropheryma whipplei str. Twist	Phenylacetate-CoA oxygenase, PaaA subunit
paaB	Arthrobacter aurescens TC1 Gene: AAur_3225: Phenylacetate-CoA oxygenase, PaaB subunit	Arthrobacter chlorophenolicus A6 Gene: Achl_2963: Phenylacetate-CoA oxygenase, PaaB subunit	Arthrobacter sp. FB24 Gene: Arth_3217: Phenylacetate-CoA oxygenase, PaaB subunit	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01000723: Phenylacetate-CoA oxygenase, PaaB subunit	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_02140: Phenylacetate-CoA oxygenase, PaaB subunit	Kytococcus sedentarius DSM 20547 Gene: Ksed_09300: Phenylacetate-CoA oxygenase, PaaB subunit	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2661: Phenylacetate-CoA oxygenase, PaaB subunit	Tropheryma whipplei str. Twist	Phenylacetate-CoA oxygenase, PaaB subunit
paaC	Arthrobacter aurescens TC1 Gene: AAur_3224: Phenylacetate-CoA oxygenase, PaaC subunit	Arthrobacter chlorophenolicus A6 Gene: Achl_2962: Phenylacetate-CoA oxygenase, PaaC subunit	Arthrobacter sp. FB24 Gene: Arth_3216: Phenylacetate-CoA oxygenase, PaaC subunit	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01000724: Phenylacetate-CoA oxygenase, PaaC subunit	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_02130: Phenylacetate-CoA oxygenase, PaaC subunit	Kytococcus sedentarius DSM 20547 Gene: Ksed_09310: Phenylacetate-CoA oxygenase, PaaC subunit	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2660: Phenylacetate-CoA oxygenase, PaaC subunit	Tropheryma whipplei str. Twist	Phenylacetate-CoA oxygenase, PaaC subunit
paaD	Arthrobacter aurescens TC1 Gene: AAur_3223: Phenylacetate-CoA oxygenase, PaaD subunit	Arthrobacter chlorophenolicus A6 Gene: Achl_2961: Phenylacetate-CoA oxygenase, PaaD subunit	Arthrobacter sp. FB24 Gene: Arth_3215: Phenylacetate-CoA oxygenase, PaaD subunit	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01000725: Phenylacetate-CoA oxygenase, PaaD subunit	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_02120: Phenylacetate-CoA oxygenase, PaaD subunit	Kytococcus sedentarius DSM 20547 Gene: Ksed_09320: Phenylacetate-CoA oxygenase, PaaD subunit	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2659: Phenylacetate-CoA oxygenase, PaaD subunit	Tropheryma whipplei str. Twist	Phenylacetate-CoA oxygenase, PaaD subunit
paaE	Arthrobacter aurescens TC1 Gene: AAur_3222: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Arthrobacter chlorophenolicus A6 Gene: Achl_2960: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Arthrobacter sp. FB24 Gene: Arth_3214: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01000726: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_02110: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Kytococcus sedentarius DSM 20547 Gene: Ksed_09330: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2658: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Tropheryma whipplei str. Twist	Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaJ	* Arthrobacter aurescens TC1 Site: position = -63 score = 4.68486 sequence = ATAGAACGAACGGTCGGTATAT Gene: AAur_3260: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	* Arthrobacter chlorophenolicus A6 Site: position = -83 score = 5.55788 sequence = ACAGAACGAACGGTCGGTAAGT Site: position = -87 score = 5.23596 sequence = ATTTACAGAACGAACGGTCGGT Gene: Achl_3063: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	* Arthrobacter sp. FB24 Site: position = -83 score = 5.09372 sequence = ATAGAACGAACGGTCGGTAAAT Gene: Arth_3268: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01000727: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_02300: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	* Renibacterium salmoninarum ATCC 33209 Site: position = -46 score = 4.74155 sequence = ATTGAACGATTGGTCAGTAAAT Gene: RSal33209_2690: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Tropheryma whipplei str. Twist	Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
paaF	Arthrobacter aurescens TC1 Gene: AAur_3259: Enoyl-CoA hydratase (EC 4.2.1.17)	Arthrobacter chlorophenolicus A6 Gene: Achl_3062: Enoyl-CoA hydratase (EC 4.2.1.17)	Arthrobacter sp. FB24 Gene: Arth_3267: Enoyl-CoA hydratase (EC 4.2.1.17)	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01000728: Enoyl-CoA hydratase (EC 4.2.1.17)	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_02290: Enoyl-CoA hydratase (EC 4.2.1.17)	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2689: Enoyl-CoA hydratase (EC 4.2.1.17)	Tropheryma whipplei str. Twist	Enoyl-CoA hydratase (EC 4.2.1.17)
paaH	Arthrobacter aurescens TC1 Gene: AAur_3258: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Arthrobacter chlorophenolicus A6 Gene: Achl_3061: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Arthrobacter sp. FB24 Gene: Arth_3266: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01000729: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_02280: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2688: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Tropheryma whipplei str. Twist	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
paaG	Arthrobacter aurescens TC1 Gene: AAur_3221: Enoyl-CoA hydratase (EC 4.2.1.17)	Arthrobacter chlorophenolicus A6 Gene: Achl_2959: Enoyl-CoA hydratase (EC 4.2.1.17)	Arthrobacter sp. FB24 Gene: Arth_3213: Enoyl-CoA hydratase (EC 4.2.1.17)	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01000730: Enoyl-CoA hydratase (EC 4.2.1.17)	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_02100: Enoyl-CoA hydratase (EC 4.2.1.17)	Kytococcus sedentarius DSM 20547 Gene: Ksed_19430: Enoyl-CoA hydratase (EC 4.2.1.17)	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2657: Enoyl-CoA hydratase (EC 4.2.1.17)	Tropheryma whipplei str. Twist	Enoyl-CoA hydratase (EC 4.2.1.17)

CRON 2.
paaT	* Arthrobacter aurescens TC1 Site: position = -70 score = 5.13094 sequence = CCTAACTGACCGTTCTGTCGGT Gene: AAur_2544: Predicted phylacetic acid transporter PaaT	* Arthrobacter chlorophenolicus A6 Site: position = -73 score = 5.33 sequence = ACCAACTGACCGTTCTGTCGGT Gene: Achl_2302: Predicted phylacetic acid transporter PaaT	* Arthrobacter sp. FB24 Site: position = -87 score = 5.70611 sequence = ACTGACCGTTCGATCGGTAATT Gene: Arth_2568: Predicted phylacetic acid transporter PaaT	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	* Brevibacterium linens BL2 Site: position = -191 score = 5.47491 sequence = ACTAACCAATCGGTCGGTTATT Gene: BlinB01000710: Predicted phylacetic acid transporter PaaT	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	* Kocuria rhizophila DC2201 Site: position = -81 score = 4.59608 sequence = CAAGACCAATCGGTCGGTAAAT Gene: KRH_02310: Predicted phylacetic acid transporter PaaT	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_1501: Predicted phylacetic acid transporter PaaT	Tropheryma whipplei str. Twist	Predicted phylacetic acid transporter PaaT

CRON 3.
paaI	* Arthrobacter aurescens TC1 Site: position = -42 score = 5.12582 sequence = ACCTAATGAACATTCGGTAAAT Gene: AAur_3243: Phenylacetic acid degradation protein PaaI, thioesterase	* Arthrobacter chlorophenolicus A6 Site: position = -42 score = 5.12582 sequence = ACCTAATGAACATTCGGTAAAT Gene: Achl_3047: Phenylacetic acid degradation protein PaaI, thioesterase	* Arthrobacter sp. FB24 Site: position = -42 score = 5.12582 sequence = ACCTAATGAACATTCGGTAAAT Gene: Arth_3246: Phenylacetic acid degradation protein PaaI, thioesterase	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	* Brevibacterium linens BL2 Site: position = -138 score = 4.43893 sequence = ATTGACCAGATGGTCGTTTATT Gene: BlinB01000721: Phenylacetic acid degradation protein PaaI, thioesterase	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	* Kocuria rhizophila DC2201 Site: position = -38 score = 5.01457 sequence = ACTGACCGATCGTTCTGAAAAT Site: position = -181 score = 4.80947 sequence = AATAACTGACCGCTCGTTCAGA Gene: KRH_02160: Phenylacetic acid degradation protein PaaI, thioesterase	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2672: Phenylacetic acid degradation protein PaaI, thioesterase	Tropheryma whipplei str. Twist	Phenylacetic acid degradation protein PaaI, thioesterase
paaK	Arthrobacter aurescens TC1 Gene: AAur_3244: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Arthrobacter chlorophenolicus A6 Gene: Achl_3048: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Arthrobacter sp. FB24 Gene: Arth_3247: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01000720: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_02170: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2673: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Tropheryma whipplei str. Twist	Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaR	Arthrobacter aurescens TC1	* Arthrobacter chlorophenolicus A6 Site: position = -32 score = 4.57995 sequence = GCTGACCGACCGTTCGTGAGAA Gene: Achl_3049: transcriptional regulator, TetR family	* Arthrobacter sp. FB24 Site: position = -32 score = 4.35886 sequence = ATTGACCGAACGTTCATGAGAA Gene: Arth_3248: transcriptional regulator, TetR family	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01000719: transcriptional regulator, TetR family	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_02180: transcriptional regulator, TetR family	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2674: transcriptional regulator, TetR family	Tropheryma whipplei str. Twist	transcriptional regulator, TetR family

CRON 4.
paaY	Arthrobacter aurescens TC1	* Arthrobacter chlorophenolicus A6 Site: position = -70 score = 4.55059 sequence = GATTACTGACCGTCCGTTCGGT Site: position = -66 score = 5.62733 sequence = ACTGACCGTCCGTTCGGTAATA Gene: Achl_3054: putative thioesterase family domain protein	* Arthrobacter sp. FB24 Site: position = -132 score = 4.5818 sequence = CATTACTGACCGTCCGTTCGGT Site: position = -128 score = 5.62733 sequence = ACTGACCGTCCGTTCGGTAATA Gene: Arth_3256: putative thioesterase family domain protein	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	* Kocuria rhizophila DC2201 Site: position = -268 score = 5.25846 sequence = GTTAGCCGAACGATCGGTCAGT Site: position = -264 score = 4.23055 sequence = GCCGAACGATCGGTCAGTATTG Gene: KRH_02210: putative thioesterase family domain protein	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	putative thioesterase family domain protein

CRON 5.
RSal33209_2682	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	* Renibacterium salmoninarum ATCC 33209 Site: position = -91 score = 4.8245 sequence = AATTACTGACCACTCGTTCAGT Gene: RSal33209_2682: 2-hydroxyphenylacetyl-CoA ring opening enzyme	Tropheryma whipplei str. Twist	2-hydroxyphenylacetyl-CoA ring opening enzyme
paaZ	* Arthrobacter aurescens TC1 Site: position = -61 score = 5.4321 sequence = TATTACCGAACGGCCGGTCAGT Gene: AAur_3246: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Arthrobacter chlorophenolicus A6 Site: position = -82 score = 5.62733 sequence = TATTACCGAACGGACGGTCAGT Gene: Achl_3053: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Arthrobacter sp. FB24 Site: position = -72 score = 5.62733 sequence = TATTACCGAACGGACGGTCAGT Gene: Arth_3255: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	* Brevibacterium linens BL2 Site: position = -101 score = 5.47491 sequence = AATAACCGACCGATTGGTTAGT Gene: BlinB01000711: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	* Kocuria rhizophila DC2201 Site: position = -48 score = 5.25846 sequence = ACTGACCGATCGTTCGGCTAAC Gene: KRH_02200: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	2 Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_2680: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Gene: RSal33209_2681: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	Tropheryma whipplei str. Twist	Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PaaR - Micrococcineae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --