Profile of regulator PaaR2 in Deinococcus-Thermus
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Phenylacetic acid degradation |
| Effector: |
Phenylacetyl-CoA |
| Regulog: |
PaaR2 - Deinococcus-Thermus |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Deinococcus deserti VCD115
|
|
Deide_01560 |
phbA |
-37 |
6.2 |
CTAACGAGCGTTAGGTTG |
|
Deide_14880 |
pccB |
-31 |
6.2 |
CAAACGAGCGTTTGTTAG |
|
Deide_11350 |
mcm |
-71 |
5.9 |
CTAACGGGCGTTAGTTTT |
|
Deide_23440 |
bkdA1 |
-87 |
6 |
CTAACGAACGTTAGATAG |
|
Deide_10580 |
bcd2 |
-27 |
6 |
CTAACGGTCGTTTGGTAG |
|
Deide_10010 |
hmgcL |
6 |
5.8 |
GTAACGAACGTTCGTTTG |
|
Deide_03290 |
accB |
-95 |
4.5 |
CAAACGACCGTTAGGTGA |
|
Deide_02390 |
paaR |
-95 |
4.8 |
CAAACGAGCGTTAGGTGA |
|
Deinococcus geothermalis DSM 11300
|
|
Dgeo_0811 |
pccB |
-31 |
6.4 |
CTAACGGGCGTTTGTTAG |
|
Dgeo_1320 |
mcm2 |
-55 |
5.7 |
CTAACGTGCGTTCGTTCG |
|
Dgeo_2338 |
bkdA1 |
-90 |
6.2 |
CTAACGAGCGTTAGCTAG |
|
Dgeo_1253 |
hmgcL |
-35 |
5.6 |
CCAACGAACGCTTGTTTG |
|
Dgeo_0862 |
mcm |
-38 |
6.1 |
CTAACGAGCGTTTGTTTC |
|
Dgeo_1179 |
bcd2 |
-27 |
6.2 |
CTAACAAGCGTTTGGTAG |
|
Dgeo_0117 |
paaR |
-61 |
4.8 |
CAAACGGACGTTCACTTG |
|
Dgeo_0467 |
accB |
-89 |
5.3 |
CTAACGACCGTTCGGGAG |
|
Deinococcus radiodurans R1
|
|
DR1072 |
phbA |
-37 |
4.8 |
CTAACGCTCGTTAGTCTC |
|
DR1084 |
mcm2 |
-55 |
4.6 |
CGAACGCTCGTTCGGTTC |
|
DR0460 |
acsA |
-69 |
5.6 |
CTCACAAACGTTCGTTAG |
|
DR1542 |
pccB |
-31 |
6.4 |
CTAACGGGCGTTTGTTAG |
|
DR1189 |
mcm |
-11 |
5.6 |
CAAACAAGCGTTTGTTTT |
|
DR0029 |
bkdA1 |
-49 |
5.6 |
CTAACGCTCGTTAGCTAG |
|
DR1255 |
bcd2 |
-27 |
5.8 |
CTAACGCCCGTTTGGTAG |
|
DR1240 |
hmgcL |
-32 |
5.7 |
CCAACAAACGTTCGTTTG |
|
DR0118 |
accB |
-133 |
5.7 |
CAAACGGGCGTTAGGTTG |
|
DR2376 |
paaR |
-68 |
5.4 |
CAAACGCCCGTTTGGTTG |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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