Regulog PaaR - Actinobacteria

Properties
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 85 sites [see more]

Member of regulog collections

By trascription factor - PaaR
By TF family - TetR
By effector - Phenylacetyl-CoA
By pathway - Phenylacetic acid degradation

Statistics of regulated genes
Genome	Genes	Operons
Acidothermus cellulolyticus 11B	6	2
Arthrobacter chlorophenolicus A6	15	6
Arthrobacter sp. FB24	14	6
Brevibacterium linens BL2	11	3
Corynebacterium efficiens YS-314	17	7
Kocuria rhizophila DC2201	15	5
Mycobacterium abscessus ATCC 19977	13	4
Nakamurella multipartita DSM 44233	9	2
Nocardia farcinica IFM 10152	14	3
Rhodococcus erythropolis PR4	14	5
Rhodococcus opacus B4	15	5
Rhodococcus sp. RHA1	15	5
Saccharomonospora viridis DSM 43017	10	3
Saccharopolyspora erythraea NRRL 2338	8	2
Streptomyces avermitilis MA-4680	12	5
Streptomyces coelicolor A3(2)	13	5
Streptomyces griseus subsp. griseus NBRC 13350	11	5

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																		Function

CRON 1.
bkdA	Acidothermus cellulolyticus 11B	Arthrobacter chlorophenolicus A6 Gene: Achl_2905: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	Arthrobacter sp. FB24 Gene: Arth_3193: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	Brevibacterium linens BL2 Gene: BlinB01003357: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	Corynebacterium efficiens YS-314	Kocuria rhizophila DC2201 Gene: KRH_21250: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	Mycobacterium abscessus ATCC 19977	Nakamurella multipartita DSM 44233	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Saccharomonospora viridis DSM 43017	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_5542: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	* Streptomyces avermitilis MA-4680 Site: position = -77 score = 5.51192 sequence = GACGACCGAACAATCGGTAGGT Gene: SAV_4362: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	* Streptomyces coelicolor A3(2) Site: position = -78 score = 5.51192 sequence = GACGACCGAACAATCGGTAGGT Gene: SCO3831: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	* Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -127 score = 5.59169 sequence = CGCGACCGAACAATCGGTAGGT Gene: SGR_3748: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
bkdB	Acidothermus cellulolyticus 11B	Arthrobacter chlorophenolicus A6 Gene: Achl_2904: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Arthrobacter sp. FB24 Gene: Arth_3192: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Brevibacterium linens BL2 Gene: BlinB01003356: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Corynebacterium efficiens YS-314	Kocuria rhizophila DC2201 Gene: KRH_21260: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Mycobacterium abscessus ATCC 19977	Nakamurella multipartita DSM 44233	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Saccharomonospora viridis DSM 43017	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_5543: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Streptomyces avermitilis MA-4680 Gene: SAV_4363: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Streptomyces coelicolor A3(2) Gene: SCO3830: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_3749: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
bkdC	Acidothermus cellulolyticus 11B	Arthrobacter chlorophenolicus A6 Gene: Achl_2903: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Arthrobacter sp. FB24 Gene: Arth_3191: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Brevibacterium linens BL2 Gene: BlinB01003355: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Corynebacterium efficiens YS-314	Kocuria rhizophila DC2201 Gene: KRH_21270: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Mycobacterium abscessus ATCC 19977	Nakamurella multipartita DSM 44233	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Saccharomonospora viridis DSM 43017	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_5544: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Streptomyces avermitilis MA-4680 Gene: SAV_4364: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Streptomyces coelicolor A3(2) Gene: SCO3829: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_3750: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)

CRON 2.
hisE	Acidothermus cellulolyticus 11B	Arthrobacter chlorophenolicus A6 Gene: Achl_1674: phosphoribosyl-ATP diphosphatase	Arthrobacter sp. FB24 Gene: Arth_1679: phosphoribosyl-ATP diphosphatase	Brevibacterium linens BL2 Gene: BlinB01000126: phosphoribosyl-ATP diphosphatase	* Corynebacterium efficiens YS-314 Site: position = -23 score = 5.13982 sequence = AACAACCGCACGATCGGTATGT Gene: CE1635: phosphoribosyl-ATP diphosphatase	Kocuria rhizophila DC2201 Gene: KRH_11730: phosphoribosyl-ATP diphosphatase	Mycobacterium abscessus ATCC 19977 Gene: MAB_2131: phosphoribosyl-ATP diphosphatase	Nakamurella multipartita DSM 44233 Gene: Namu_2980: phosphoribosyl-ATP diphosphatase	Nocardia farcinica IFM 10152 Gene: nfa31860: phosphoribosyl-ATP diphosphatase	Rhodococcus erythropolis PR4 Gene: RER_31850: phosphoribosyl-ATP diphosphatase	Rhodococcus opacus B4 Gene: ROP_05930: phosphoribosyl-ATP diphosphatase	Rhodococcus sp. RHA1 Gene: RHA1_ro00855: phosphoribosyl-ATP diphosphatase	Saccharomonospora viridis DSM 43017 Gene: Svir_22180: phosphoribosyl-ATP diphosphatase	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_2237: phosphoribosyl-ATP diphosphatase	Streptomyces avermitilis MA-4680 Gene: SAV_6906: phosphoribosyl-ATP diphosphatase	Streptomyces coelicolor A3(2) Gene: SCO1439: phosphoribosyl-ATP diphosphatase	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_6094: phosphoribosyl-ATP diphosphatase	phosphoribosyl-ATP diphosphatase
hisG	Acidothermus cellulolyticus 11B Gene: Acel_1270: ATP phosphoribosyltransferase (EC 2.4.2.17)	Arthrobacter chlorophenolicus A6 Gene: Achl_1675: ATP phosphoribosyltransferase (EC 2.4.2.17)	Arthrobacter sp. FB24 Gene: Arth_1680: ATP phosphoribosyltransferase (EC 2.4.2.17)	Brevibacterium linens BL2 Gene: BlinB01000125: ATP phosphoribosyltransferase (EC 2.4.2.17)	Corynebacterium efficiens YS-314 Gene: CE1634: ATP phosphoribosyltransferase (EC 2.4.2.17)	Kocuria rhizophila DC2201 Gene: KRH_11740: ATP phosphoribosyltransferase (EC 2.4.2.17)	Mycobacterium abscessus ATCC 19977 Gene: MAB_2132: ATP phosphoribosyltransferase (EC 2.4.2.17)	Nakamurella multipartita DSM 44233 Gene: Namu_2979: ATP phosphoribosyltransferase (EC 2.4.2.17)	Nocardia farcinica IFM 10152 Gene: nfa31850: ATP phosphoribosyltransferase (EC 2.4.2.17)	Rhodococcus erythropolis PR4 Gene: RER_31840: ATP phosphoribosyltransferase (EC 2.4.2.17)	Rhodococcus opacus B4 Gene: ROP_05920: ATP phosphoribosyltransferase (EC 2.4.2.17)	Rhodococcus sp. RHA1 Gene: RHA1_ro00854: ATP phosphoribosyltransferase (EC 2.4.2.17)	Saccharomonospora viridis DSM 43017 Gene: Svir_22170: ATP phosphoribosyltransferase (EC 2.4.2.17)	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_2238: ATP phosphoribosyltransferase (EC 2.4.2.17)	Streptomyces avermitilis MA-4680 Gene: SAV_6907: ATP phosphoribosyltransferase (EC 2.4.2.17)	Streptomyces coelicolor A3(2) Gene: SCO1438: ATP phosphoribosyltransferase (EC 2.4.2.17)	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_6095: ATP phosphoribosyltransferase (EC 2.4.2.17)	ATP phosphoribosyltransferase (EC 2.4.2.17)

CRON 3.
paaJ	Acidothermus cellulolyticus 11B	* Arthrobacter chlorophenolicus A6 Site: position = -83 score = 6.06424 sequence = ACAGAACGAACGGTCGGTAAGT Gene: Achl_3063: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	* Arthrobacter sp. FB24 Site: position = -83 score = 5.38954 sequence = ATAGAACGAACGGTCGGTAAAT Gene: Arth_3268: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Brevibacterium linens BL2 Gene: BlinB01000727: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Corynebacterium efficiens YS-314 Gene: CE0673: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Kocuria rhizophila DC2201 Gene: KRH_02300: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	* Mycobacterium abscessus ATCC 19977 Site: position = -44 score = 6.19901 sequence = ACCGACCGAACGATCGGTTATT Gene: MAB_0902: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Nakamurella multipartita DSM 44233	* Nocardia farcinica IFM 10152 Site: position = -49 score = 5.81919 sequence = ACTGACCGAATGTTCGGTAATA Gene: nfa21570: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Rhodococcus erythropolis PR4	* Rhodococcus opacus B4 Site: position = -148 score = 5.14428 sequence = TTTCACCGTACGTTCGGTCGGT Site: position = -53 score = 5.33985 sequence = ACCGACCGAAGATTCGGTTATT Gene: ROP_25860: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	* Rhodococcus sp. RHA1 Site: position = -149 score = 5.14428 sequence = TTTCACCGTACGTTCGGTCGGT Site: position = -53 score = 5.33985 sequence = ACCGACCGAAGATTCGGTTATT Gene: RHA1_ro02863: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)	Saccharomonospora viridis DSM 43017	Saccharopolyspora erythraea NRRL 2338	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350	Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
paaF	Acidothermus cellulolyticus 11B	Arthrobacter chlorophenolicus A6 Gene: Achl_3062: Enoyl-CoA hydratase (EC 4.2.1.17)	Arthrobacter sp. FB24 Gene: Arth_3267: Enoyl-CoA hydratase (EC 4.2.1.17)	Brevibacterium linens BL2 Gene: BlinB01000728: Enoyl-CoA hydratase (EC 4.2.1.17)	Corynebacterium efficiens YS-314 Gene: CE0674: Enoyl-CoA hydratase (EC 4.2.1.17)	Kocuria rhizophila DC2201 Gene: KRH_02290: Enoyl-CoA hydratase (EC 4.2.1.17)	Mycobacterium abscessus ATCC 19977 Gene: MAB_0903: Enoyl-CoA hydratase (EC 4.2.1.17)	Nakamurella multipartita DSM 44233	Nocardia farcinica IFM 10152 Gene: nfa21580: Enoyl-CoA hydratase (EC 4.2.1.17)	* Rhodococcus erythropolis PR4 Site: position = 29 score = 5.68047 sequence = AACGACCGAATGTTCGGTTATT Gene: RER_55530: Enoyl-CoA hydratase (EC 4.2.1.17)	Rhodococcus opacus B4 Gene: ROP_25850: Enoyl-CoA hydratase (EC 4.2.1.17)	Rhodococcus sp. RHA1 Gene: RHA1_ro02862: Enoyl-CoA hydratase (EC 4.2.1.17)	Saccharomonospora viridis DSM 43017	Saccharopolyspora erythraea NRRL 2338	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350	Enoyl-CoA hydratase (EC 4.2.1.17)
paaH	Acidothermus cellulolyticus 11B Gene: Acel_0147: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Arthrobacter chlorophenolicus A6 Gene: Achl_3061: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Arthrobacter sp. FB24 Gene: Arth_3266: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Brevibacterium linens BL2 Gene: BlinB01000729: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Corynebacterium efficiens YS-314 Gene: CE0675: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Kocuria rhizophila DC2201 Gene: KRH_02280: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Mycobacterium abscessus ATCC 19977 Gene: MAB_0904: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Nakamurella multipartita DSM 44233 Gene: Namu_2482: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Nocardia farcinica IFM 10152 Gene: nfa21590: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Rhodococcus erythropolis PR4 Gene: RER_55520: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Rhodococcus opacus B4 Gene: ROP_25840: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Rhodococcus sp. RHA1 Gene: RHA1_ro02861: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	* Saccharomonospora viridis DSM 43017 Site: position = -116 score = 5.74761 sequence = ACTGACCGAATGGACGGTTACT Gene: Svir_26550: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Saccharopolyspora erythraea NRRL 2338	* Streptomyces avermitilis MA-4680 Site: position = -74 score = 6.04741 sequence = AGTAACCGAACGATCGGTCGGG Gene: SAV_4359: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	* Streptomyces coelicolor A3(2) Site: position = -74 score = 6.04741 sequence = AGTAACCGAACGATCGGTCGGG Gene: SCO3834: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	Streptomyces griseus subsp. griseus NBRC 13350	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
paaG	Acidothermus cellulolyticus 11B Gene: Acel_1836: Enoyl-CoA hydratase (EC 4.2.1.17)	Arthrobacter chlorophenolicus A6 Gene: Achl_2959: Enoyl-CoA hydratase (EC 4.2.1.17)	Arthrobacter sp. FB24 Gene: Arth_3213: Enoyl-CoA hydratase (EC 4.2.1.17)	Brevibacterium linens BL2 Gene: BlinB01000730: Enoyl-CoA hydratase (EC 4.2.1.17)	Corynebacterium efficiens YS-314 Gene: CE0672: Enoyl-CoA hydratase (EC 4.2.1.17)	Kocuria rhizophila DC2201 Gene: KRH_02100: Enoyl-CoA hydratase (EC 4.2.1.17)	Mycobacterium abscessus ATCC 19977 Gene: MAB_0905: Enoyl-CoA hydratase (EC 4.2.1.17)	Nakamurella multipartita DSM 44233 Gene: Namu_2150: Enoyl-CoA hydratase (EC 4.2.1.17)	Nocardia farcinica IFM 10152 Gene: nfa21600: Enoyl-CoA hydratase (EC 4.2.1.17)	Rhodococcus erythropolis PR4 Gene: RER_55510: Enoyl-CoA hydratase (EC 4.2.1.17)	Rhodococcus opacus B4 Gene: ROP_25830: Enoyl-CoA hydratase (EC 4.2.1.17)	Rhodococcus sp. RHA1 Gene: RHA1_ro02860: Enoyl-CoA hydratase (EC 4.2.1.17)	Saccharomonospora viridis DSM 43017 Gene: Svir_06370: Enoyl-CoA hydratase (EC 4.2.1.17)	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_1028: Enoyl-CoA hydratase (EC 4.2.1.17)	Streptomyces avermitilis MA-4680 Gene: SAV_3120: Enoyl-CoA hydratase (EC 4.2.1.17)	Streptomyces coelicolor A3(2) Gene: SCO5144: Enoyl-CoA hydratase (EC 4.2.1.17)	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_2381: Enoyl-CoA hydratase (EC 4.2.1.17)	Enoyl-CoA hydratase (EC 4.2.1.17)
paaA	* Acidothermus cellulolyticus 11B Site: position = -41 score = 5.34778 sequence = GTCAACCGAACATTCGGTCGGT Gene: Acel_1443: Phenylacetate-CoA oxygenase, PaaA subunit	* Arthrobacter chlorophenolicus A6 Site: position = -64 score = 5.82946 sequence = CCTGAACGAACGGTCGGTAAAT Gene: Achl_2964: Phenylacetate-CoA oxygenase, PaaA subunit	* Arthrobacter sp. FB24 Site: position = -49 score = 5.88382 sequence = CCTGAACGAACGGTCGGTAATT Gene: Arth_3218: Phenylacetate-CoA oxygenase, PaaA subunit	* Brevibacterium linens BL2 Site: position = -105 score = 4.50547 sequence = CAATACAGAACAAATGGTCAGT Gene: BlinB01000722: Phenylacetate-CoA oxygenase, PaaA subunit	* Corynebacterium efficiens YS-314 Site: position = -128 score = 6.07241 sequence = ACTGACCGGGCGGTCGGTTAGT Gene: CE0667: Phenylacetate-CoA oxygenase, PaaA subunit	* Kocuria rhizophila DC2201 Site: position = -210 score = 5.57424 sequence = ATTTTCAGAACGATCGGTCAGT Site: position = -67 score = 5.00629 sequence = TCTGAACGAGCGGTCAGTTATT Gene: KRH_02150: Phenylacetate-CoA oxygenase, PaaA subunit	* Mycobacterium abscessus ATCC 19977 Site: position = -37 score = 6.17773 sequence = AATAACCGAACATTCGGTCGGT Gene: MAB_0906: Phenylacetate-CoA oxygenase, PaaA subunit	* Nakamurella multipartita DSM 44233 Site: position = -70 score = 6.0197 sequence = TCTTACTGACCGTTCGGTCAGT Gene: Namu_2491: Phenylacetate-CoA oxygenase, PaaA subunit	Nocardia farcinica IFM 10152 Gene: nfa21610: Phenylacetate-CoA oxygenase, PaaA subunit	* Rhodococcus erythropolis PR4 Site: position = -35 score = 5.03299 sequence = ACCAACCGATCATTCGGTAATA Gene: RER_55500: Phenylacetate-CoA oxygenase, PaaA subunit	* Rhodococcus opacus B4 Site: position = 23 score = 5.03299 sequence = ACCAACCGATCATTCGGTAATA Gene: ROP_25820: Phenylacetate-CoA oxygenase, PaaA subunit	* Rhodococcus sp. RHA1 Site: position = -34 score = 5.03299 sequence = ACCAACCGATCATTCGGTAATA Gene: RHA1_ro02859: Phenylacetate-CoA oxygenase, PaaA subunit	Saccharomonospora viridis DSM 43017 Gene: Svir_26530: Phenylacetate-CoA oxygenase, PaaA subunit	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_3544: Phenylacetate-CoA oxygenase, PaaA subunit	* Streptomyces avermitilis MA-4680 Site: position = -52 score = 5.93709 sequence = GCGAACCGAACGATCGGTCGGT Gene: SAV_4354: Phenylacetate-CoA oxygenase, PaaA subunit	* Streptomyces coelicolor A3(2) Site: position = -157 score = 5.27229 sequence = CCCGACCGACCATTCGGTTAGC Site: position = -34 score = 5.31018 sequence = ACCGAACGAATGGTCGGTTGGG Gene: SCO7471: Phenylacetate-CoA oxygenase, PaaA subunit	* Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -34 score = 6.14672 sequence = AGGAACCGAACGATCGGTCGGT Gene: SGR_3741: Phenylacetate-CoA oxygenase, PaaA subunit	Phenylacetate-CoA oxygenase, PaaA subunit
paaB	Acidothermus cellulolyticus 11B Gene: Acel_1442: Phenylacetate-CoA oxygenase, PaaB subunit	Arthrobacter chlorophenolicus A6 Gene: Achl_2963: Phenylacetate-CoA oxygenase, PaaB subunit	Arthrobacter sp. FB24 Gene: Arth_3217: Phenylacetate-CoA oxygenase, PaaB subunit	Brevibacterium linens BL2 Gene: BlinB01000723: Phenylacetate-CoA oxygenase, PaaB subunit	Corynebacterium efficiens YS-314 Gene: CE0668: Phenylacetate-CoA oxygenase, PaaB subunit	Kocuria rhizophila DC2201 Gene: KRH_02140: Phenylacetate-CoA oxygenase, PaaB subunit	Mycobacterium abscessus ATCC 19977 Gene: MAB_0907: Phenylacetate-CoA oxygenase, PaaB subunit	Nakamurella multipartita DSM 44233 Gene: Namu_2490: Phenylacetate-CoA oxygenase, PaaB subunit	Nocardia farcinica IFM 10152 Gene: nfa21620: Phenylacetate-CoA oxygenase, PaaB subunit	Rhodococcus erythropolis PR4 Gene: RER_55490: Phenylacetate-CoA oxygenase, PaaB subunit	Rhodococcus opacus B4 Gene: ROP_25810: Phenylacetate-CoA oxygenase, PaaB subunit	Rhodococcus sp. RHA1 Gene: RHA1_ro02858: Phenylacetate-CoA oxygenase, PaaB subunit	Saccharomonospora viridis DSM 43017 Gene: Svir_26520: Phenylacetate-CoA oxygenase, PaaB subunit	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_3545: Phenylacetate-CoA oxygenase, PaaB subunit	Streptomyces avermitilis MA-4680 Gene: SAV_4353: Phenylacetate-CoA oxygenase, PaaB subunit	Streptomyces coelicolor A3(2) Gene: SCO7472: Phenylacetate-CoA oxygenase, PaaB subunit	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_3740: Phenylacetate-CoA oxygenase, PaaB subunit	Phenylacetate-CoA oxygenase, PaaB subunit
paaC	Acidothermus cellulolyticus 11B Gene: Acel_1441: Phenylacetate-CoA oxygenase, PaaC subunit	Arthrobacter chlorophenolicus A6 Gene: Achl_2962: Phenylacetate-CoA oxygenase, PaaC subunit	Arthrobacter sp. FB24 Gene: Arth_3216: Phenylacetate-CoA oxygenase, PaaC subunit	Brevibacterium linens BL2 Gene: BlinB01000724: Phenylacetate-CoA oxygenase, PaaC subunit	Corynebacterium efficiens YS-314 Gene: CE0669: Phenylacetate-CoA oxygenase, PaaC subunit	Kocuria rhizophila DC2201 Gene: KRH_02130: Phenylacetate-CoA oxygenase, PaaC subunit	Mycobacterium abscessus ATCC 19977 Gene: MAB_0908: Phenylacetate-CoA oxygenase, PaaC subunit	Nakamurella multipartita DSM 44233 Gene: Namu_2489: Phenylacetate-CoA oxygenase, PaaC subunit	Nocardia farcinica IFM 10152 Gene: nfa21630: Phenylacetate-CoA oxygenase, PaaC subunit	Rhodococcus erythropolis PR4 Gene: RER_55480: Phenylacetate-CoA oxygenase, PaaC subunit	Rhodococcus opacus B4 Gene: ROP_25800: Phenylacetate-CoA oxygenase, PaaC subunit	Rhodococcus sp. RHA1 Gene: RHA1_ro02857: Phenylacetate-CoA oxygenase, PaaC subunit	Saccharomonospora viridis DSM 43017 Gene: Svir_26510: Phenylacetate-CoA oxygenase, PaaC subunit	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_3546: Phenylacetate-CoA oxygenase, PaaC subunit	Streptomyces avermitilis MA-4680 Gene: SAV_4352: Phenylacetate-CoA oxygenase, PaaC subunit	Streptomyces coelicolor A3(2) Gene: SCO7473: Phenylacetate-CoA oxygenase, PaaC subunit	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_3739: Phenylacetate-CoA oxygenase, PaaC subunit	Phenylacetate-CoA oxygenase, PaaC subunit
paaD	Acidothermus cellulolyticus 11B Gene: Acel_1440: Phenylacetate-CoA oxygenase, PaaD subunit	Arthrobacter chlorophenolicus A6 Gene: Achl_2961: Phenylacetate-CoA oxygenase, PaaD subunit	Arthrobacter sp. FB24 Gene: Arth_3215: Phenylacetate-CoA oxygenase, PaaD subunit	Brevibacterium linens BL2 Gene: BlinB01000725: Phenylacetate-CoA oxygenase, PaaD subunit	Corynebacterium efficiens YS-314 Gene: CE0670: Phenylacetate-CoA oxygenase, PaaD subunit	Kocuria rhizophila DC2201 Gene: KRH_02120: Phenylacetate-CoA oxygenase, PaaD subunit	Mycobacterium abscessus ATCC 19977 Gene: MAB_0909: Phenylacetate-CoA oxygenase, PaaD subunit	Nakamurella multipartita DSM 44233 Gene: Namu_2488: Phenylacetate-CoA oxygenase, PaaD subunit	Nocardia farcinica IFM 10152 Gene: nfa21640: Phenylacetate-CoA oxygenase, PaaD subunit	Rhodococcus erythropolis PR4 Gene: RER_55470: Phenylacetate-CoA oxygenase, PaaD subunit	Rhodococcus opacus B4 Gene: ROP_25790: Phenylacetate-CoA oxygenase, PaaD subunit	Rhodococcus sp. RHA1 Gene: RHA1_ro02856: Phenylacetate-CoA oxygenase, PaaD subunit	Saccharomonospora viridis DSM 43017 Gene: Svir_26500: Phenylacetate-CoA oxygenase, PaaD subunit	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_3547: Phenylacetate-CoA oxygenase, PaaD subunit	Streptomyces avermitilis MA-4680 Gene: SAV_4351: Phenylacetate-CoA oxygenase, PaaD subunit	Streptomyces coelicolor A3(2) Gene: SCO7474: Phenylacetate-CoA oxygenase, PaaD subunit	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_3738: Phenylacetate-CoA oxygenase, PaaD subunit	Phenylacetate-CoA oxygenase, PaaD subunit
paaE	Acidothermus cellulolyticus 11B Gene: Acel_1439: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Arthrobacter chlorophenolicus A6 Gene: Achl_2960: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Arthrobacter sp. FB24 Gene: Arth_3214: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Brevibacterium linens BL2 Gene: BlinB01000726: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Corynebacterium efficiens YS-314 Gene: CE0671: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Kocuria rhizophila DC2201 Gene: KRH_02110: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Mycobacterium abscessus ATCC 19977 Gene: MAB_0910: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Nakamurella multipartita DSM 44233 Gene: Namu_2487: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Nocardia farcinica IFM 10152 Gene: nfa21650: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Rhodococcus erythropolis PR4 Gene: RER_55460: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Rhodococcus opacus B4 Gene: ROP_25780: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Rhodococcus sp. RHA1 Gene: RHA1_ro02855: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Saccharomonospora viridis DSM 43017 Gene: Svir_26490: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_3548: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Streptomyces avermitilis MA-4680 Gene: SAV_4350: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Streptomyces coelicolor A3(2) Gene: SCO7475: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Streptomyces griseus subsp. griseus NBRC 13350 Gene: SGR_3737: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)	Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaK	Acidothermus cellulolyticus 11B	Arthrobacter chlorophenolicus A6 Gene: Achl_3048: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Arthrobacter sp. FB24 Gene: Arth_3247: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Brevibacterium linens BL2 Gene: BlinB01000720: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	* Corynebacterium efficiens YS-314 Site: position = -176 score = 5.43404 sequence = ACTTACCGACTGGTCAGTTGGT Gene: CE0663: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Kocuria rhizophila DC2201 Gene: KRH_02170: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Mycobacterium abscessus ATCC 19977 Gene: MAB_0911: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Nakamurella multipartita DSM 44233	Nocardia farcinica IFM 10152 Gene: nfa21660: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Rhodococcus erythropolis PR4 Gene: RER_55450: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Rhodococcus opacus B4 Gene: ROP_25770: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Rhodococcus sp. RHA1 Gene: RHA1_ro02854: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Saccharomonospora viridis DSM 43017 Gene: Svir_26570: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	* Saccharopolyspora erythraea NRRL 2338 Site: position = -232 score = 5.18149 sequence = TTTTACCGACCGTTCGTTCGGT Site: position = -94 score = 5.48238 sequence = AATAACCGACTACTCGGTCAGT Gene: SACE_3542: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	* Streptomyces avermitilis MA-4680 Site: position = -56 score = 4.6858 sequence = GGCTACCGAATGATCGGTCGCC Gene: SAV_1257: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Streptomyces coelicolor A3(2) Gene: SCO7469: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	* Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -77 score = 4.96859 sequence = ATCGACCGAATGATCGGTCGCC Gene: SGR_6814: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaZ	* Acidothermus cellulolyticus 11B Site: position = -177 score = 4.86841 sequence = GCCGACCGAACGTTCGGTCTAG Gene: Acel_1435: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Arthrobacter chlorophenolicus A6 Site: position = -82 score = 6.04604 sequence = TATTACCGAACGGACGGTCAGT Gene: Achl_3053: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Arthrobacter sp. FB24 Site: position = -72 score = 6.04604 sequence = TATTACCGAACGGACGGTCAGT Gene: Arth_3255: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Brevibacterium linens BL2 Site: position = -101 score = 5.88031 sequence = AATAACCGACCGATTGGTTAGT Gene: BlinB01000711: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Corynebacterium efficiens YS-314 Site: position = -121 score = 5.78983 sequence = ACTGACCGGCCGTTCGGTAACT Gene: CE0677: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Kocuria rhizophila DC2201 Site: position = -48 score = 4.80935 sequence = ACTGACCGATCGTTCGGCTAAC Gene: KRH_02200: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Mycobacterium abscessus ATCC 19977 Site: position = -35 score = 5.43532 sequence = ACCGAACGAATGGACGGTTGGT Gene: MAB_0900c: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	Nakamurella multipartita DSM 44233 Gene: Namu_2485: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Nocardia farcinica IFM 10152 Site: position = -36 score = 5.09163 sequence = AATTACCGACCGAATGTTCAGT Gene: nfa21550: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Rhodococcus erythropolis PR4 Site: position = -32 score = 5.42981 sequence = ACCGACCGAACGTACGGTGAGA Gene: RER_55550: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Rhodococcus opacus B4 Site: position = -127 score = 5.56083 sequence = AATAACCGAATCTTCGGTCGGT Site: position = -32 score = 5.11525 sequence = ACCGACCGAACGTACGGTGAAA Gene: ROP_25870: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Rhodococcus sp. RHA1 Site: position = -32 score = 5.11525 sequence = ACCGACCGAACGTACGGTGAAA Site: position = -128 score = 5.56083 sequence = AATAACCGAATCTTCGGTCGGT Gene: RHA1_ro02864: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Saccharomonospora viridis DSM 43017 Site: position = -39 score = 5.74156 sequence = ACTTCCTGAACGTTCGGTTGGT Gene: Svir_26540: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Saccharopolyspora erythraea NRRL 2338 Site: position = -186 score = 5.62814 sequence = ACTGACCGAGTAGTCGGTTATT Site: position = -52 score = 5.83397 sequence = CGTTACCGAACGAACGGTCGGT Gene: SACE_3543: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Streptomyces avermitilis MA-4680 Site: position = -96 score = 5.16879 sequence = CCCGACCGATCGTTCGGTTACT Gene: SAV_4358: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Streptomyces coelicolor A3(2) Site: position = -106 score = 5.16879 sequence = CCCGACCGATCGTTCGGTTACT Gene: SCO3835: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	* Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -72 score = 5.16879 sequence = CCCGACCGATCGTTCGGTTACT Gene: SGR_3745: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ	Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
paaT	Acidothermus cellulolyticus 11B	* Arthrobacter chlorophenolicus A6 Site: position = -73 score = 5.28592 sequence = ACCAACTGACCGTTCTGTCGGT Gene: Achl_2302: Predicted phylacetic acid transporter PaaT	* Arthrobacter sp. FB24 Site: position = -87 score = 5.52782 sequence = ACTGACCGTTCGATCGGTAATT Gene: Arth_2568: Predicted phylacetic acid transporter PaaT	* Brevibacterium linens BL2 Site: position = -191 score = 5.28281 sequence = ACTAACCAATCGGTCGGTTATT Gene: BlinB01000710: Predicted phylacetic acid transporter PaaT	Corynebacterium efficiens YS-314 Gene: CE0662: Predicted phylacetic acid transporter PaaT	* Kocuria rhizophila DC2201 Site: position = -85 score = 4.76001 sequence = ACGTCAAGACCAATCGGTCGGT Gene: KRH_02310: Predicted phylacetic acid transporter PaaT	Mycobacterium abscessus ATCC 19977	Nakamurella multipartita DSM 44233	Nocardia farcinica IFM 10152	* Rhodococcus erythropolis PR4 Site: position = -178 score = 4.60944 sequence = ACCTACCGATCATTCGGTTGCC Gene: RER_44780: Predicted phylacetic acid transporter PaaT	* Rhodococcus opacus B4 Site: position = -122 score = 5.49122 sequence = ACCAACCGAACGTACGGTTATA Site: position = -39 score = 5.40443 sequence = CCTGACCGAACAATCGGTCGAG Gene: ROP_17540: Predicted phylacetic acid transporter PaaT	* Rhodococcus sp. RHA1 Site: position = -124 score = 5.49122 sequence = ACCAACCGAACGTACGGTTATA Site: position = -40 score = 4.80433 sequence = CCTGACCGAACAGTCGTTCGCA Gene: RHA1_ro02082: Predicted phylacetic acid transporter PaaT	Saccharomonospora viridis DSM 43017 Gene: Svir_18260: Predicted phylacetic acid transporter PaaT	Saccharopolyspora erythraea NRRL 2338	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350	Predicted phylacetic acid transporter PaaT
ethD	Acidothermus cellulolyticus 11B	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Brevibacterium linens BL2	Corynebacterium efficiens YS-314	Kocuria rhizophila DC2201	Mycobacterium abscessus ATCC 19977 Gene: MAB_0899c: Possible ethyl tert-butyl ether degradation protein EthD	Nakamurella multipartita DSM 44233	Nocardia farcinica IFM 10152 Gene: nfa21540: Possible ethyl tert-butyl ether degradation protein EthD	Rhodococcus erythropolis PR4 Gene: RER_55560: Possible ethyl tert-butyl ether degradation protein EthD	Rhodococcus opacus B4 Gene: ROP_25880: Possible ethyl tert-butyl ether degradation protein EthD	Rhodococcus sp. RHA1 Gene: RHA1_ro02865: Possible ethyl tert-butyl ether degradation protein EthD	Saccharomonospora viridis DSM 43017	Saccharopolyspora erythraea NRRL 2338	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350	Possible ethyl tert-butyl ether degradation protein EthD
paaI	Acidothermus cellulolyticus 11B Gene: Acel_1660: Phenylacetic acid degradation protein PaaI, thioesterase	* Arthrobacter chlorophenolicus A6 Site: position = -42 score = 5.25667 sequence = ACCTAATGAACATTCGGTAAAT Gene: Achl_3047: Phenylacetic acid degradation protein PaaI, thioesterase	* Arthrobacter sp. FB24 Site: position = -42 score = 5.25667 sequence = ACCTAATGAACATTCGGTAAAT Gene: Arth_3246: Phenylacetic acid degradation protein PaaI, thioesterase	Brevibacterium linens BL2 Gene: BlinB01000721: Phenylacetic acid degradation protein PaaI, thioesterase	* Corynebacterium efficiens YS-314 Site: position = -58 score = 5.09696 sequence = TACTACCGTCCATTCGGTAAGT Gene: CE0666: Phenylacetic acid degradation protein PaaI, thioesterase	* Kocuria rhizophila DC2201 Site: position = -38 score = 4.65102 sequence = ACTGACCGATCGTTCTGAAAAT Site: position = -181 score = 4.79563 sequence = AATAACTGACCGCTCGTTCAGA Gene: KRH_02160: Phenylacetic acid degradation protein PaaI, thioesterase	Mycobacterium abscessus ATCC 19977	Nakamurella multipartita DSM 44233 Gene: Namu_2481: Phenylacetic acid degradation protein PaaI, thioesterase	Nocardia farcinica IFM 10152 Gene: nfa21530: Phenylacetic acid degradation protein PaaI, thioesterase	Rhodococcus erythropolis PR4 Gene: RER_55570: Phenylacetic acid degradation protein PaaI, thioesterase	Rhodococcus opacus B4 Gene: ROP_25890: Phenylacetic acid degradation protein PaaI, thioesterase	Rhodococcus sp. RHA1 Gene: RHA1_ro02866: Phenylacetic acid degradation protein PaaI, thioesterase	* Saccharomonospora viridis DSM 43017 Site: position = -42 score = 5.73763 sequence = AGTAACCGTCCATTCGGTCAGT Gene: Svir_26560: Phenylacetic acid degradation protein PaaI, thioesterase	Saccharopolyspora erythraea NRRL 2338	Streptomyces avermitilis MA-4680	* Streptomyces coelicolor A3(2) Site: position = -152 score = 5.01265 sequence = CCCAACCGACCATTCGTTCGGT Site: position = -29 score = 5.54906 sequence = GCTAACCGAATGGTCGGTCGGG Gene: SCO7470: Phenylacetic acid degradation protein PaaI, thioesterase	Streptomyces griseus subsp. griseus NBRC 13350	Phenylacetic acid degradation protein PaaI, thioesterase
paaR	Acidothermus cellulolyticus 11B Gene: Acel_1436: Transcriptional regulator of phenylacetic acid degradation, TetR family	Arthrobacter chlorophenolicus A6 Gene: Achl_3049: Transcriptional regulator of phenylacetic acid degradation, TetR family	Arthrobacter sp. FB24 Gene: Arth_3248: Transcriptional regulator of phenylacetic acid degradation, TetR family	Brevibacterium linens BL2 Gene: BlinB01000719: Transcriptional regulator of phenylacetic acid degradation, TetR family	* Corynebacterium efficiens YS-314 Site: position = -599 score = 5.61864 sequence = ACTAACCGACCGCCCGGTCAGT Gene: CE0665: Transcriptional regulator of phenylacetic acid degradation, TetR family	Kocuria rhizophila DC2201 Gene: KRH_02180: Transcriptional regulator of phenylacetic acid degradation, TetR family	* Mycobacterium abscessus ATCC 19977 Site: position = -92 score = 5.87975 sequence = AATAACCGATCGTTCGGTCGGT Gene: MAB_0901c: Transcriptional regulator of phenylacetic acid degradation, TetR family	* Nakamurella multipartita DSM 44233 Site: position = -43 score = 6.14096 sequence = ACTGACCGAATGATCGGTCAGC Gene: Namu_2483: Transcriptional regulator of phenylacetic acid degradation, TetR family	* Nocardia farcinica IFM 10152 Site: position = -81 score = 6.05123 sequence = TATTACCGAACATTCGGTCAGT Gene: nfa21560: Transcriptional regulator of phenylacetic acid degradation, TetR family	* Rhodococcus erythropolis PR4 Site: position = -80 score = 5.91754 sequence = AATAACCGAACATTCGGTCGTT Gene: RER_55540: Transcriptional regulator of phenylacetic acid degradation, TetR family	* Rhodococcus opacus B4 Site: position = -80 score = 4.63114 sequence = CTGAACCGAACCTTCGGTCGGC Gene: ROP_23860: Transcriptional regulator of phenylacetic acid degradation, TetR family	* Rhodococcus sp. RHA1 Site: position = -80 score = 4.73987 sequence = TTCAACCGAACCTTCGGTCGGC Gene: RHA1_ro02633: Transcriptional regulator of phenylacetic acid degradation, TetR family	Saccharomonospora viridis DSM 43017 Gene: Svir_26580: Transcriptional regulator of phenylacetic acid degradation, TetR family	Saccharopolyspora erythraea NRRL 2338 Gene: SACE_3541: Transcriptional regulator of phenylacetic acid degradation, TetR family	Streptomyces avermitilis MA-4680 Gene: SAV_4360: Transcriptional regulator of phenylacetic acid degradation, TetR family	Streptomyces coelicolor A3(2) Gene: SCO3833: Transcriptional regulator of phenylacetic acid degradation, TetR family	* Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -106 score = 6.04741 sequence = AGTAACCGAACGATCGGTCGGG Gene: SGR_3746: Transcriptional regulator of phenylacetic acid degradation, TetR family	Transcriptional regulator of phenylacetic acid degradation, TetR family
paaY	Acidothermus cellulolyticus 11B	* Arthrobacter chlorophenolicus A6 Site: position = -66 score = 5.5101 sequence = ACTGACCGTCCGTTCGGTAATA Gene: Achl_3054: thioesterase superfamily protein	* Arthrobacter sp. FB24 Site: position = -128 score = 5.5101 sequence = ACTGACCGTCCGTTCGGTAATA Gene: Arth_3256: thioesterase superfamily protein	Brevibacterium linens BL2	* Corynebacterium efficiens YS-314 Site: position = -47 score = 6.01934 sequence = AGTTACCGAACGGCCGGTCAGT Gene: CE0676: thioesterase superfamily protein	* Kocuria rhizophila DC2201 Site: position = -268 score = 5.46504 sequence = GTTAGCCGAACGATCGGTCAGT Gene: KRH_02210: thioesterase superfamily protein	Mycobacterium abscessus ATCC 19977	Nakamurella multipartita DSM 44233	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Saccharomonospora viridis DSM 43017	Saccharopolyspora erythraea NRRL 2338	Streptomyces avermitilis MA-4680	Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350	thioesterase superfamily protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PaaR - Actinobacteria

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --