Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PaaR in Arthrobacter chlorophenolicus A6

Properties
Regulator type: Transcription factor
TF locus tag: Achl_3049
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Regulog: PaaR - Actinobacteria
Statistics of regulated genes:
- Genes 15
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 85 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -42
Score: 5.3
Sequence: ACCTAATGAACATTCGGTAAAT
Locus tag: Achl_3047
Name: paaI
Funciton: Phenylacetic acid degradation protein PaaI, thioesterase
Locus tag: Achl_3048
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: Achl_3049
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaI
Phenylacetic acid degradation protein PaaI, thioesterase
paaK
Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaR
Transcriptional regulator of phenylacetic acid degradation, TetR family

Position: -73
Score: 5.3
Sequence: ACCAACTGACCGTTCTGTCGGT
Locus tag: Achl_2302
Name: paaT
Funciton: Predicted phylacetic acid transporter PaaT
paaT
Predicted phylacetic acid transporter PaaT

Position: -64
Score: 5.8
Sequence: CCTGAACGAACGGTCGGTAAAT
Locus tag: Achl_2964
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Achl_2963
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Achl_2962
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Achl_2961
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Achl_2960
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Achl_2959
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
paaA
Phenylacetate-CoA oxygenase, PaaA subunit
paaB
Phenylacetate-CoA oxygenase, PaaB subunit
paaC
Phenylacetate-CoA oxygenase, PaaC subunit
paaD
Phenylacetate-CoA oxygenase, PaaD subunit
paaE
Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaG
Enoyl-CoA hydratase (EC 4.2.1.17)

Position: -82
Score: 6
Sequence: TATTACCGAACGGACGGTCAGT
Locus tag: Achl_3053
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
paaZ
Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ

Position: -83
Score: 6.1
Sequence: ACAGAACGAACGGTCGGTAAGT
Locus tag: Achl_3063
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: Achl_3062
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Achl_3061
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
paaJ
Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
paaF
Enoyl-CoA hydratase (EC 4.2.1.17)
paaH
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)

Position: -66
Score: 5.5
Sequence: ACTGACCGTCCGTTCGGTAATA
Locus tag: Achl_3054
Name: paaY
Funciton: thioesterase superfamily protein
paaY
thioesterase superfamily protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD