Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator PaaR in Actinobacteria

Properties
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Regulog: PaaR - Actinobacteria
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Acidothermus cellulolyticus 11B
Acel_1443 paaA -41 5.3 GTCAACCGAACATTCGGTCGGT
Acel_1435 paaZ -177 4.9 GCCGACCGAACGTTCGGTCTAG
Arthrobacter chlorophenolicus A6
Achl_3063 paaJ -83 6.1 ACAGAACGAACGGTCGGTAAGT
Achl_3053 paaZ -82 6 TATTACCGAACGGACGGTCAGT
Achl_2964 paaA -64 5.8 CCTGAACGAACGGTCGGTAAAT
Achl_2302 paaT -73 5.3 ACCAACTGACCGTTCTGTCGGT
Achl_3047 paaI -42 5.3 ACCTAATGAACATTCGGTAAAT
Achl_3054 paaY -66 5.5 ACTGACCGTCCGTTCGGTAATA
Arthrobacter sp. FB24
Arth_2568 paaT -87 5.5 ACTGACCGTTCGATCGGTAATT
Arth_3246 paaI -42 5.3 ACCTAATGAACATTCGGTAAAT
Arth_3268 paaJ -83 5.4 ATAGAACGAACGGTCGGTAAAT
Arth_3255 paaZ -72 6 TATTACCGAACGGACGGTCAGT
Arth_3218 paaA -49 5.9 CCTGAACGAACGGTCGGTAATT
Arth_3256 paaY -128 5.5 ACTGACCGTCCGTTCGGTAATA
Brevibacterium linens BL2
BlinB01000711 paaZ -101 5.9 AATAACCGACCGATTGGTTAGT
BlinB01000710 paaT -191 5.3 ACTAACCAATCGGTCGGTTATT
BlinB01000722 paaA -105 4.5 CAATACAGAACAAATGGTCAGT
Corynebacterium efficiens YS-314
CE0665 paaR -599 5.6 ACTAACCGACCGCCCGGTCAGT
CE1635 hisE -23 5.1 AACAACCGCACGATCGGTATGT
CE0667 paaA -128 6.1 ACTGACCGGGCGGTCGGTTAGT
CE0677 paaZ -121 5.8 ACTGACCGGCCGTTCGGTAACT
CE0663 paaK -176 5.4 ACTTACCGACTGGTCAGTTGGT
CE0666 paaI -58 5.1 TACTACCGTCCATTCGGTAAGT
CE0676 paaY -47 6 AGTTACCGAACGGCCGGTCAGT
Kocuria rhizophila DC2201
KRH_02200 paaZ -48 4.8 ACTGACCGATCGTTCGGCTAAC
KRH_02310 paaT -85 4.8 ACGTCAAGACCAATCGGTCGGT
KRH_02160 paaI -38 4.7 ACTGACCGATCGTTCTGAAAAT
KRH_02150 paaA -210 5.6 ATTTTCAGAACGATCGGTCAGT
KRH_02150 paaA -67 5 TCTGAACGAGCGGTCAGTTATT
KRH_02160 paaI -181 4.8 AATAACTGACCGCTCGTTCAGA
KRH_02210 paaY -268 5.5 GTTAGCCGAACGATCGGTCAGT
Mycobacterium abscessus ATCC 19977
MAB_0901c paaR -92 5.9 AATAACCGATCGTTCGGTCGGT
MAB_0900c paaZ -35 5.4 ACCGAACGAATGGACGGTTGGT
MAB_0902 paaJ -44 6.2 ACCGACCGAACGATCGGTTATT
MAB_0906 paaA -37 6.2 AATAACCGAACATTCGGTCGGT
Nakamurella multipartita DSM 44233
Namu_2491 paaA -70 6 TCTTACTGACCGTTCGGTCAGT
Namu_2483 paaR -43 6.1 ACTGACCGAATGATCGGTCAGC
Nocardia farcinica IFM 10152
nfa21570 paaJ -49 5.8 ACTGACCGAATGTTCGGTAATA
nfa21560 paaR -81 6.1 TATTACCGAACATTCGGTCAGT
nfa21550 paaZ -36 5.1 AATTACCGACCGAATGTTCAGT
Rhodococcus erythropolis PR4
RER_55540 paaR -80 5.9 AATAACCGAACATTCGGTCGTT
RER_55550 paaZ -32 5.4 ACCGACCGAACGTACGGTGAGA
RER_55530 paaF 29 5.7 AACGACCGAATGTTCGGTTATT
RER_55500 paaA -35 5 ACCAACCGATCATTCGGTAATA
RER_44780 paaT -178 4.6 ACCTACCGATCATTCGGTTGCC
Rhodococcus opacus B4
ROP_25860 paaJ -148 5.1 TTTCACCGTACGTTCGGTCGGT
ROP_25860 paaJ -53 5.3 ACCGACCGAAGATTCGGTTATT
ROP_25820 paaA 23 5 ACCAACCGATCATTCGGTAATA
ROP_25870 paaZ -127 5.6 AATAACCGAATCTTCGGTCGGT
ROP_25870 paaZ -32 5.1 ACCGACCGAACGTACGGTGAAA
ROP_23860 paaR -80 4.6 CTGAACCGAACCTTCGGTCGGC
ROP_17540 paaT -122 5.5 ACCAACCGAACGTACGGTTATA
ROP_17540 paaT -39 5.4 CCTGACCGAACAATCGGTCGAG
Rhodococcus sp. RHA1
RHA1_ro02633 paaR -80 4.7 TTCAACCGAACCTTCGGTCGGC
RHA1_ro02864 paaZ -32 5.1 ACCGACCGAACGTACGGTGAAA
RHA1_ro02864 paaZ -128 5.6 AATAACCGAATCTTCGGTCGGT
RHA1_ro02863 paaJ -149 5.1 TTTCACCGTACGTTCGGTCGGT
RHA1_ro02863 paaJ -53 5.3 ACCGACCGAAGATTCGGTTATT
RHA1_ro02859 paaA -34 5 ACCAACCGATCATTCGGTAATA
RHA1_ro02082 paaT -124 5.5 ACCAACCGAACGTACGGTTATA
RHA1_ro02082 paaT -40 4.8 CCTGACCGAACAGTCGTTCGCA
Saccharomonospora viridis DSM 43017
Svir_26550 paaH -116 5.7 ACTGACCGAATGGACGGTTACT
Svir_26540 paaZ -39 5.7 ACTTCCTGAACGTTCGGTTGGT
Svir_26560 paaI -42 5.7 AGTAACCGTCCATTCGGTCAGT
Saccharopolyspora erythraea NRRL 2338
SACE_3542 paaK -232 5.2 TTTTACCGACCGTTCGTTCGGT
SACE_3542 paaK -94 5.5 AATAACCGACTACTCGGTCAGT
SACE_3543 paaZ -186 5.6 ACTGACCGAGTAGTCGGTTATT
SACE_3543 paaZ -52 5.8 CGTTACCGAACGAACGGTCGGT
Streptomyces avermitilis MA-4680
SAV_4354 paaA -52 5.9 GCGAACCGAACGATCGGTCGGT
SAV_1257 paaK -56 4.7 GGCTACCGAATGATCGGTCGCC
SAV_4359 paaH -74 6 AGTAACCGAACGATCGGTCGGG
SAV_4358 paaZ -96 5.2 CCCGACCGATCGTTCGGTTACT
SAV_4362 bkdA -77 5.5 GACGACCGAACAATCGGTAGGT
Streptomyces coelicolor A3(2)
SCO3831 bkdA -78 5.5 GACGACCGAACAATCGGTAGGT
SCO7471 paaA -157 5.3 CCCGACCGACCATTCGGTTAGC
SCO7471 paaA -34 5.3 ACCGAACGAATGGTCGGTTGGG
SCO7470 paaI -152 5 CCCAACCGACCATTCGTTCGGT
SCO7470 paaI -29 5.5 GCTAACCGAATGGTCGGTCGGG
SCO3834 paaH -74 6 AGTAACCGAACGATCGGTCGGG
SCO3835 paaZ -106 5.2 CCCGACCGATCGTTCGGTTACT
Streptomyces griseus subsp. griseus NBRC 13350
SGR_3741 paaA -34 6.1 AGGAACCGAACGATCGGTCGGT
SGR_6814 paaK -77 5 ATCGACCGAATGATCGGTCGCC
SGR_3746 paaR -106 6 AGTAACCGAACGATCGGTCGGG
SGR_3745 paaZ -72 5.2 CCCGACCGATCGTTCGGTTACT
SGR_3748 bkdA -127 5.6 CGCGACCGAACAATCGGTAGGT
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