Regulon of PaaR in Brevibacterium linens BL2
| Regulator type: | Transcription factor |
| TF locus tag: | BlinB01000719 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Phenylacetic acid degradation |
| Effector: | Phenylacetyl-CoA |
| Regulog: | PaaR - Actinobacteria |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PaaR
- By TF family - TetR
- By effector - Phenylacetyl-CoA
- By pathway - Phenylacetic acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -191
Score: 5.3 Sequence: ACTAACCAATCGGTCGGTTATT
Locus tag: BlinB01000710
Name: paaT Funciton: Predicted phylacetic acid transporter PaaT |
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paaT
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Predicted phylacetic acid transporter PaaT
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Position: -101
Score: 5.9 Sequence: AATAACCGACCGATTGGTTAGT
Locus tag: BlinB01000711
Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ |
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paaZ
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Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
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Position: -105
Score: 4.5 Sequence: CAATACAGAACAAATGGTCAGT
Locus tag: BlinB01000722
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: BlinB01000723
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: BlinB01000724
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: BlinB01000725
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: BlinB01000726
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: BlinB01000727
Name: paaJ Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: BlinB01000728
Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: BlinB01000729
Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: BlinB01000730
Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) |
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paaA
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Phenylacetate-CoA oxygenase, PaaA subunit
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paaB
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Phenylacetate-CoA oxygenase, PaaB subunit
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paaC
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Phenylacetate-CoA oxygenase, PaaC subunit
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paaD
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Phenylacetate-CoA oxygenase, PaaD subunit
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paaE
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Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
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paaJ
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Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
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paaF
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Enoyl-CoA hydratase (EC 4.2.1.17)
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paaH
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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paaG
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Enoyl-CoA hydratase (EC 4.2.1.17)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |