Regulon of PaaR in Kocuria rhizophila DC2201

Properties
Regulator type:	Transcription factor
TF locus tag:	KRH_02180
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Regulog:	PaaR - Actinobacteria
Statistics of regulated genes:
- Genes	15
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 85 sites [see more]

Member of regulog collections

By trascription factor - PaaR
By TF family - TetR
By effector - Phenylacetyl-CoA
By pathway - Phenylacetic acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -48 Score: 4.8 Sequence: ACTGACCGATCGTTCGGCTAAC Locus tag: KRH_02200 Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
	KRH_02200	paaZ	Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Position: -85 Score: 4.8 Sequence: ACGTCAAGACCAATCGGTCGGT Locus tag: KRH_02310 Name: paaT Funciton: Predicted phylacetic acid transporter PaaT Locus tag: KRH_02300 Name: paaJ Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) Locus tag: KRH_02290 Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: KRH_02280 Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
	KRH_02310	paaT	Predicted phylacetic acid transporter PaaT
	KRH_02300	paaJ	Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
	KRH_02290	paaF	Enoyl-CoA hydratase (EC 4.2.1.17)
	KRH_02280	paaH	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Position: -268 Score: 5.5 Sequence: GTTAGCCGAACGATCGGTCAGT Locus tag: KRH_02210 Name: paaY Funciton: thioesterase superfamily protein
	KRH_02210	paaY	thioesterase superfamily protein
Position: -210 Score: 5.6 Sequence: ATTTTCAGAACGATCGGTCAGT Position: -67 Score: 5 Sequence: TCTGAACGAGCGGTCAGTTATT Locus tag: KRH_02150 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: KRH_02140 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: KRH_02130 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: KRH_02120 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: KRH_02110 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-) Locus tag: KRH_02100 Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	KRH_02150	paaA	Phenylacetate-CoA oxygenase, PaaA subunit
	KRH_02140	paaB	Phenylacetate-CoA oxygenase, PaaB subunit
	KRH_02130	paaC	Phenylacetate-CoA oxygenase, PaaC subunit
	KRH_02120	paaD	Phenylacetate-CoA oxygenase, PaaD subunit
	KRH_02110	paaE	Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
	KRH_02100	paaG	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -181 Score: 4.8 Sequence: AATAACTGACCGCTCGTTCAGA Position: -38 Score: 4.7 Sequence: ACTGACCGATCGTTCTGAAAAT Locus tag: KRH_02160 Name: paaI Funciton: Phenylacetic acid degradation protein PaaI, thioesterase Locus tag: KRH_02170 Name: paaK Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30) Locus tag: KRH_02180 Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
	KRH_02160	paaI	Phenylacetic acid degradation protein PaaI, thioesterase
	KRH_02170	paaK	Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
	KRH_02180	paaR	Transcriptional regulator of phenylacetic acid degradation, TetR family

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of PaaR in Kocuria rhizophila DC2201

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --