Profile of regulator PaaR in Nocardiaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Phenylacetic acid degradation |
| Effector: |
Phenylacetyl-CoA |
| Regulog: |
PaaR - Nocardiaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Nocardia farcinica IFM 10152
|
|
nfa21560 |
paaR |
-81 |
5.9 |
TATTACCGAACATTCGGTCAGT |
|
nfa21550 |
paaZ |
-32 |
5.3 |
ACCGACCGAATGTTCAGTTGAA |
|
nfa20960 |
paaQ |
-78 |
5.8 |
ACTGACCGAACAGTCGGTAATA |
|
nfa21570 |
paaJ |
-49 |
5.9 |
ACTGACCGAATGTTCGGTAATA |
|
Rhodococcus erythropolis PR4
|
|
RER_55540 |
paaR |
-80 |
6 |
AATAACCGAACATTCGGTCGTT |
|
RER_55550 |
paaZ |
-32 |
5.6 |
ACCGACCGAACGTACGGTGAGA |
|
RER_55500 |
paaA |
-35 |
5.6 |
ACCAACCGATCATTCGGTAATA |
|
Rhodococcus opacus B4
|
|
ROP_17540 |
paaT |
-122 |
5.7 |
ACCAACCGAACGTACGGTTATA |
|
ROP_17540 |
paaT |
-39 |
5.4 |
CCTGACCGAACAATCGGTCGAG |
|
ROP_23860 |
paaR |
-80 |
4.8 |
CTGAACCGAACCTTCGGTCGGC |
|
ROP_25870 |
paaZ |
-127 |
5.7 |
AATAACCGAATCTTCGGTCGGT |
|
ROP_25870 |
paaZ |
-32 |
5.4 |
ACCGACCGAACGTACGGTGAAA |
|
ROP_25860 |
paaJ |
-148 |
5.4 |
TTTCACCGTACGTTCGGTCGGT |
|
ROP_25860 |
paaJ |
-53 |
5.7 |
ACCGACCGAAGATTCGGTTATT |
|
Rhodococcus sp. RHA1
|
|
RHA1_ro02082 |
paaT |
-124 |
5.7 |
ACCAACCGAACGTACGGTTATA |
|
RHA1_ro02082 |
paaT |
-40 |
5.1 |
CCTGACCGAACAGTCGTTCGCA |
|
RHA1_ro02633 |
paaR |
-80 |
5.2 |
TTCAACCGAACCTTCGGTCGGC |
|
RHA1_ro02864 |
paaZ |
-128 |
5.7 |
AATAACCGAATCTTCGGTCGGT |
|
RHA1_ro02864 |
paaZ |
-32 |
5.4 |
ACCGACCGAACGTACGGTGAAA |
|
RHA1_ro02863 |
paaJ |
-149 |
5.4 |
TTTCACCGTACGTTCGGTCGGT |
|
RHA1_ro02863 |
paaJ |
-53 |
5.7 |
ACCGACCGAAGATTCGGTTATT |
|
RHA1_ro02859 |
paaA |
-34 |
5.6 |
ACCAACCGATCATTCGGTAATA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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