Profile of regulator PaaR in Ralstonia
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Phenylacetic acid degradation |
| Effector: |
Phenylacetyl-CoA |
| Regulog: |
PaaR - Ralstonia |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Cupriavidus taiwanensis
|
|
RALTA_A0085 |
paaG |
-31 |
6.6 |
ATTAACCGACCGATCGGTTGGT |
|
RALTA_A2973 |
paaA |
-83 |
6.2 |
ATTGACCGACCGGTCGGCTTAT |
|
RALTA_A2763 |
paaF |
-89 |
5.7 |
GCCGACCGACTGGTCGGTTTAT |
|
Ralstonia eutropha H16
|
|
H16_A0142 |
paaG |
-72 |
6.2 |
ATTAACCGACCGATCGGTTGGC |
|
H16_A3311 |
paaF |
-90 |
5.7 |
GCCGACCGACTGGTCGGTTTAT |
|
H16_A3520 |
paaA |
-79 |
5.7 |
ATTGACCGACCGGTCGGCATAT |
|
Ralstonia eutropha JMP134
|
|
Reut_A3015 |
paaF |
-61 |
6.2 |
ACCGACCGATCGGTCGGTTAAT |
|
Reut_A3206 |
paaA |
-95 |
6.2 |
ATTGACCGACCGGTCGGCTTAT |
|
Reut_A0110 |
paaG |
-73 |
6.4 |
ATTTACCGACCGGCCGGTTGGT |
|
Ralstonia metallidurans CH34
|
|
Rmet_3162 |
paaF2 |
-149 |
6.1 |
ATTAACCGACCAGTCGGTCGGC |
|
Rmet_3163 |
paaF |
-100 |
5.8 |
GCCGACCGACTGGTCGGTTAAT |
|
Rmet_3369 |
paaA |
-113 |
6.8 |
ATTGACCGACCGGTCGGTTTAT |
|
Ralstonia pickettii 12J
|
|
Rpic_4567 |
paaA |
-96 |
6.3 |
ATTGACCGACCGGTCGGACGGT |
|
Rpic_3114 |
paaF2 |
-53 |
6.5 |
ATTAACCGACCGGTTGGTCGGC |
|
Rpic_3115 |
paaF |
-52 |
6.2 |
GCCGACCAACCGGTCGGTTAAT |
|
Ralstonia solanacearum GMI1000
|
|
RSp0604 |
paaA |
-97 |
6.3 |
ATTGACCGACCGGTCGGACGAT |
|
RSc2872 |
paaF2 |
-53 |
6.5 |
ATTAACCGACCGGTTGGTCGGC |
|
RSc2873 |
paaF |
-48 |
6.2 |
GCCGACCAACCGGTCGGTTAAT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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