Profile of regulator PaaR in Comamonadaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Phenylacetic acid degradation |
| Effector: |
Phenylacetyl-CoA |
| Regulog: |
PaaR - Comamonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Delftia acidovorans SPH-1
|
|
Daci_0809 |
paaK |
-59 |
5.7 |
TCCTACCGTCCGGTCGGTCAAT |
|
Daci_0809 |
paaK |
-63 |
4.6 |
ATAATCCTACCGTCCGGTCGGT |
|
Daci_0568 |
paaF |
-71 |
5.2 |
ATTTACCGACCATTCGGTAAAT |
|
Daci_0808 |
paaZ |
-111 |
6 |
ATTGACCGACCGGACGGTAGGA |
|
Leptothrix cholodnii SP-6
|
|
Lcho_2406 |
paaY2 |
-115 |
5.5 |
CTTGACCGACCGGTAGGTAAAT |
|
Lcho_3574 |
paaA |
-48 |
6.3 |
ATTTACCGACCGGACGGTCAAT |
|
Lcho_2405 |
paaF |
-42 |
5.8 |
ATTTACCTACCGGTCGGTCAAG |
|
Methylibium petroleiphilum PM1
|
|
Mpe_A0984 |
paaF |
-85 |
5.7 |
GTCTACCGACTGGTCGGTCAAT |
|
Mpe_A0983 |
paaY2 |
-78 |
5.6 |
ATTGACCGACCAGTCGGTAGAC |
|
Variovorax paradoxus S110
|
|
Vapar_1238 |
paaF |
-48 |
5.5 |
ATCTACCGGACGGTCGGTCAAT |
|
Vapar_1239 |
paaY2 |
-101 |
5.4 |
ATTGACCGACCGTCCGGTAGAT |
|
Vapar_1238 |
paaF |
-52 |
4.6 |
TAAAATCTACCGGACGGTCGGT |
|
Verminephrobacter eiseniae EF01-2
|
|
Veis_3942 |
paaF |
-102 |
5.5 |
ATCTACCGCACGGTCGGTCAAT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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