Regulog IolR - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Inositol utilization |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By TF family - GntR/Others
- By pathway - Inositol utilization
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium amycolatum SK46 | ||
| Corynebacterium aurimucosum ATCC 700975 | ||
| Corynebacterium diphtheriae NCTC 13129 | ||
| Corynebacterium efficiens YS-314 | ||
| Corynebacterium glutamicum ATCC 13032 | 16 | 6 |
| Corynebacterium jeikeium K411 | ||
| Corynebacterium kroppenstedtii DSM 44385 | ||
| Corynebacterium urealyticum DSM 7109 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| glgA |
Gene: CORAM0001_0595: Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type |
Gene: cauri_0997: Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type |
Gene: DIP0991: Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type |
Gene: CE1174: Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -103 score = 4.04789 sequence = AAATTGTCTAAACATCGT Gene: cg1268: Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type |
Gene: jk1384: Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type |
Gene: ckrop_0640: Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type |
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Predicted glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), Actinobacterial type |
| CRON 2. | |||||||||
| iolC |
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Corynebacterium glutamicum ATCC 13032 Site: position = -27 score = 5.07634 sequence = GCTTTGTCAGGACAATGT Site: position = -8 score = 4.67604 sequence = TTATTGTCATGACATGCG Gene: cg0197: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
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5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
| iolJ |
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Gene: cg0198: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
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5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
| iolA |
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Gene: cg0199: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
| iolB |
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Gene: cg0201: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
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5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
| iolD |
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Gene: cg0202: Epi-inositol hydrolase (EC 3.7.1.-) |
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Epi-inositol hydrolase (EC 3.7.1.-) |
| iolE |
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Gene: cg0203: Inosose dehydratase (EC 4.2.1.44) |
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Inosose dehydratase (EC 4.2.1.44) |
| iolG |
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Gene: cg0204: Inositol 2-dehydrogenase (EC 1.1.1.18 ) |
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Inositol 2-dehydrogenase (EC 1.1.1.18 ) |
| iolH |
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Gene: cg0205: putative sugar-phosphate epimerase/isomerase IolH |
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putative sugar-phosphate epimerase/isomerase IolH |
| iolP |
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Gene: cg0206: major facilitator family sugar permease |
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major facilitator family sugar permease |
| oxiA |
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Gene: cg0207: putative myo-inositol 2-dehydrogenase |
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putative myo-inositol 2-dehydrogenase |
| CRON 3. | |||||||||
| iolR |
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*
Corynebacterium glutamicum ATCC 13032 Site: position = -150 score = 3.98304 sequence = ATAATGTCAGATCAATAA Site: position = -56 score = 3.97248 sequence = CAAATGTCCTAACACATT Gene: cg0196: Inositol utilization transcriptional regulator, GntR family |
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Inositol utilization transcriptional regulator, GntR family |
| CRON 4. | |||||||||
| iolR2 |
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*
Corynebacterium glutamicum ATCC 13032 Site: position = -39 score = 4.08665 sequence = TAAATGTCCTGTCAATAG Gene: cg0210: Transcriptional regulator for inositol utilization, LacI family |
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Transcriptional regulator for inositol utilization, LacI family |
| CRON 5. | |||||||||
| iolG2 |
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*
Corynebacterium glutamicum ATCC 13032 Site: position = -118 score = 4.08665 sequence = CTATTGACAGGACATTTA Gene: cg0211: Inositol 2-dehydrogenase (EC 1.1.1.18 ) |
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Inositol 2-dehydrogenase (EC 1.1.1.18 ) |
| iolE2 |
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Gene: cg0212: Inosose dehydratase (EC 4.2.1.44) |
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Inosose dehydratase (EC 4.2.1.44) |
| CRON 6. | |||||||||
| iolT1 |
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*
Corynebacterium glutamicum ATCC 13032 Site: position = -124 score = 4.00353 sequence = CGATTGACGGGACATATC Gene: cg0223: Myo-inositol transporter, MFS family |
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Myo-inositol transporter, MFS family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |