Regulog CsoR - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | CsoR |
| Regulation mode: | repressor |
| Biological process: | Copper resistance |
| Effector: | Copper ion, (Cu+) |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - CsoR
- By taxonomy - Corynebacteriaceae
- By TF family - CsoR
- By effector - Copper ion, (Cu+)
- By pathway - Copper resistance
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium amycolatum SK46 | 3 | 1 |
| Corynebacterium aurimucosum ATCC 700975 | 2 | 1 |
| Corynebacterium diphtheriae NCTC 13129 | ||
| Corynebacterium efficiens YS-314 | 2 | 1 |
| Corynebacterium glutamicum ATCC 13032 | 4 | 2 |
| Corynebacterium jeikeium K411 | 4 | 2 |
| Corynebacterium kroppenstedtii DSM 44385 | 5 | 2 |
| Corynebacterium urealyticum DSM 7109 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| copZ |
*
Corynebacterium amycolatum SK46 Site: position = -27 score = 6.18005 sequence = ATACCCATAGGGGGTAT Gene: CORAM0001_1740: Copper insertion chaperone and transporter component |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -66 score = 6.28968 sequence = ATACCCCAGGGGGGTAT Gene: cauri_2433: Copper insertion chaperone and transporter component |
|
|
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Gene: jk0516: Copper insertion chaperone and transporter component |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -51 score = 6.11681 sequence = ATACCCATGGGGGGTAT Site: position = -17 score = 5.87114 sequence = ATACCCCAGGAGGGTAT Gene: ckrop_2049: Copper insertion chaperone and transporter component |
Gene: cur_1397: Copper insertion chaperone and transporter component |
Copper insertion chaperone and transporter component |
| copA |
Gene: CORAM0001_1739: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: cauri_2434: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: DIP2286: Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Corynebacterium efficiens YS-314 Site: position = -65 score = 6.45211 sequence = ATACCCCCCAGGGGTAT Gene: CE0407: Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -58 score = 6.51535 sequence = ATACCCCTAGGGGGTAT Gene: cg0464: Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Corynebacterium jeikeium K411 Site: position = -26 score = 6.51535 sequence = ATACCCCCTAGGGGTAT Gene: jk0638: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: ckrop_2048: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: cur_1313: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Copper-translocating P-type ATPase (EC 3.6.3.4) |
| csoR |
Gene: CORAM0001_1738: Copper resistance transcriptional regulator CsoR, CsoR family |
Gene: cauri_2147: Copper resistance transcriptional regulator CsoR, CsoR family |
|
Gene: CE0406: Copper resistance transcriptional regulator CsoR, CsoR family |
Gene: cg0463: Copper resistance transcriptional regulator CsoR, CsoR family |
Gene: jk0639: Copper resistance transcriptional regulator CsoR, CsoR family |
Gene: ckrop_2047: Copper resistance transcriptional regulator CsoR, CsoR family |
Gene: cur_1312: Copper resistance transcriptional regulator CsoR, CsoR family |
Copper resistance transcriptional regulator CsoR, CsoR family |
| CRON 2. | |||||||||
| copY |
|
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Gene: DIP0062: Copper insertion chaperone and transporter component |
|
*
Corynebacterium glutamicum ATCC 13032 Site: position = -222 score = 6.23908 sequence = ATACCCCATAGGGGTAT Gene: cg3282: Copper insertion chaperone and transporter component |
*
Corynebacterium jeikeium K411 Site: position = -93 score = 6.62919 sequence = ATACCCCCAGGGGGTAT Site: position = -67 score = 6.62919 sequence = ATACCCCCTGGGGGTAT Gene: jk1430: Copper insertion chaperone and transporter component |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -65 score = 6.56595 sequence = ATACCCCCGGGGGGTAT Gene: ckrop_1942: Copper insertion chaperone and transporter component |
|
Copper insertion chaperone and transporter component |
| copB |
|
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Gene: DIP0061: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: CE0281: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: cg3281: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: jk1429: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: ckrop_1943: Copper-translocating P-type ATPase (EC 3.6.3.4) |
|
Copper-translocating P-type ATPase (EC 3.6.3.4) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |