Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Trp_leader - Corynebacteriaceae

Properties
Regulator type: RNA regulatory element
Name: Trp_leader
RFAM: RF00513
Regulation mode:
Biological process: Tryptophan biosynthesis
Effector:
Phylum: Actinobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium glutamicum ATCC 13032
Corynebacterium efficiens YS-314 6 1
Corynebacterium diphtheriae NCTC 13129 7 2
Corynebacterium aurimucosum ATCC 700975
Corynebacterium jeikeium K411
Corynebacterium urealyticum DSM 7109
Corynebacterium amycolatum SK46
Corynebacterium kroppenstedtii DSM 44385
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
trpE
 
Corynebacterium glutamicum ATCC 13032

Gene: cg3359: Anthranilate synthase, aminase component (EC 4.1.3.27)
*
Corynebacterium efficiens YS-314

Site:
position = -185
score = 26.55
sequence = AGTGGTGGTGGCGCG...

Gene: CE2868: Anthranilate synthase, aminase component (EC 4.1.3.27)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP2352: Anthranilate synthase, aminase component (EC 4.1.3.27)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2507: Anthranilate synthase, aminase component (EC 4.1.3.27)
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Anthranilate synthase, aminase component (EC 4.1.3.27)
trpG
 
Corynebacterium glutamicum ATCC 13032

Gene: cg3360: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
 
Corynebacterium efficiens YS-314

Gene: CE2869: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP2353: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2508: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
trpD
 
Corynebacterium glutamicum ATCC 13032

Gene: cg3361: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
 
Corynebacterium efficiens YS-314

Gene: CE2870: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP2354: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2509: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
trpC
 2
Corynebacterium glutamicum ATCC 13032

Gene: cg2293: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)

Gene: cg3362: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
 2
Corynebacterium efficiens YS-314

Gene: CE2871: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)

Gene: CE1991: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
 2
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1555: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)

Gene: DIP2355: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
 2
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_1614: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)

Gene: cauri_2510: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
 
Corynebacterium jeikeium K411
 
Corynebacterium urealyticum DSM 7109
 
Corynebacterium amycolatum SK46
 
Corynebacterium kroppenstedtii DSM 44385
Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
trpB
 
Corynebacterium glutamicum ATCC 13032

Gene: cg3363: Tryptophan synthase beta chain (EC 4.2.1.20)
 2
Corynebacterium efficiens YS-314

Gene: CE2872: Tryptophan synthase beta chain (EC 4.2.1.20)

Gene: CE2880: Tryptophan synthase beta chain (EC 4.2.1.20)
*2
Corynebacterium diphtheriae NCTC 13129

Site:
position = -140
score = 27.86
sequence = AGTTCTGGTGGCGCG...

Gene: DIP2360: Tryptophan synthase beta chain (EC 4.2.1.20)

Site:
position = -174
score = 25.21
sequence = ACTGGTGGTGGCGCG...

Gene: DIP2351: Tryptophan synthase beta chain (EC 4.2.1.20)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2511: Tryptophan synthase beta chain (EC 4.2.1.20)
 
Corynebacterium jeikeium K411

Gene: jk0798: Tryptophan synthase beta chain (EC 4.2.1.20)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1164: Tryptophan synthase beta chain (EC 4.2.1.20)
 2
Corynebacterium amycolatum SK46

Gene: CORAM0001_1437: Tryptophan synthase beta chain (EC 4.2.1.20)

Gene: CORAM0001_1044: Tryptophan synthase beta chain (EC 4.2.1.20)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0796: Tryptophan synthase beta chain (EC 4.2.1.20)
Tryptophan synthase beta chain (EC 4.2.1.20)
trpA
 
Corynebacterium glutamicum ATCC 13032

Gene: cg3364: Tryptophan synthase alpha chain (EC 4.2.1.20)
 
Corynebacterium efficiens YS-314

Gene: CE2873: Tryptophan synthase alpha chain (EC 4.2.1.20)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP2361: Tryptophan synthase alpha chain (EC 4.2.1.20)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2512: Tryptophan synthase alpha chain (EC 4.2.1.20)
 
Corynebacterium jeikeium K411

Gene: jk0799: Tryptophan synthase alpha chain (EC 4.2.1.20)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1163: Tryptophan synthase alpha chain (EC 4.2.1.20)
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1043: Tryptophan synthase alpha chain (EC 4.2.1.20)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_0797: Tryptophan synthase alpha chain (EC 4.2.1.20)
Tryptophan synthase alpha chain (EC 4.2.1.20)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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