Regulon of TPP in Corynebacterium kroppenstedtii DSM 44385
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Corynebacteriaceae |
| Under regulation: | |
| - Genes | 10 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -106
Score: 52.8 Sequence: CACGACCCCACGGGA...
Locus tag: ckrop_1709
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: ckrop_1710
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiC
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Phosphomethylpyrimidine synthase
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Position: -26
Score: 54.2 Sequence: ATCGTCGACCTACGG...
Locus tag: ckrop_1717
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: ckrop_1716
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: ckrop_1715
Name: thiG Funciton: Thiazole synthase
Locus tag: ckrop_1714
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF |
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thiO
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Glycine oxidase ThiO (EC 1.4.3.19)
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thiS
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Sulfur carrier protein ThiS
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thiG
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Thiazole synthase
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thiF
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Sulfur carrier protein adenylyltransferase ThiF
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Position: -163
Score: 47.6 Sequence: CAGTACTTCGCGGGA...
Locus tag: ckrop_0610
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: ckrop_0611
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: ckrop_0612
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: ckrop_0613
Name: hmpK Funciton: predicted hydroxymethylpyrimidine kinase |
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ykoE
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Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoD
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Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoC
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Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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hmpK
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predicted hydroxymethylpyrimidine kinase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |