Regulon of TPP in Corynebacterium glutamicum ATCC 13032

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Corynebacteriaceae
Under regulation:
- Genes	13
- Operons	5

Member of regulog collections

By taxonomy - Corynebacteriaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -113 Score: 62.5 Sequence: ACTTACCCCACGGGT... Locus tag: cg2236 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: cg2237 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: cg2238 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: cg2239 Name: thiG Funciton: Thiazole synthase Locus tag: cg2240 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
	cg2236	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	cg2237	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	cg2238	thiS	Sulfur carrier protein ThiS
	cg2239	thiG	Thiazole synthase
	cg2240	thiF	Sulfur carrier protein adenylyltransferase ThiF
Position: -110 Score: 55.9 Sequence: AGGCAGTCCCCACGG... Locus tag: cg1476 Name: thiC Funciton: Phosphomethylpyrimidine synthase
	cg1476	thiC	Phosphomethylpyrimidine synthase
Position: -102 Score: 52.1 Sequence: AATACTAGGCACGGG... Locus tag: cg1655 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: cg1654 Name: thiED-tenA Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2)
	cg1655	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	cg1654	thiED-tenA	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2)
Position: -166 Score: 63.5 Sequence: TACTAGTGACACGGG... Locus tag: cg0825 Name: oarX Funciton: 3-ketoacyl-(acyl-carrier-protein) reductase (EC 1.1.1.100)
	cg0825	oarX	3-ketoacyl-(acyl-carrier-protein) reductase (EC 1.1.1.100)
Position: -100 Score: 51 Sequence: TTCATAGACACGGGT... Locus tag: cg1227 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: cg1228 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: cg1229 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: cg1230 Name: hmpK Funciton: predicted hydroxymethylpyrimidine kinase
	cg1227	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	cg1228	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	cg1229	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	cg1230	hmpK	predicted hydroxymethylpyrimidine kinase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD