Regulon of BenR in Corynebacterium efficiens YS-314

Properties
Regulator type:	Transcription factor
TF locus tag:	CE2309
Regulator family:	LuxR
Regulation mode:	activator (repressor)
Biological process:	Benzoate degradation
Effector:
Regulog:	BenR - Corynebacteriaceae
Statistics of regulated genes:
- Genes	8
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Corynebacteriaceae
By TF family - LuxR
By pathway - Benzoate degradation

Regulated operons
	Locus Tag	Name	Function
Position: -108 Score: 5.3 Sequence: TTTAGGGGGTTCCCTAGT Locus tag: CE2310 Name: benK Funciton: Benzoate transporter, MFS family
	CE2310	benK	Benzoate transporter, MFS family
Position: -117 Score: 5.4 Sequence: ATTAGGGAAAAACCTAGG Locus tag: CE2304 Name: catA Funciton: Protocatechuate 3,4-dioxygenase beta subunit (EC 1.13.11.1) Locus tag: CE2303 Name: catB Funciton: Muconate cycloisomerase (EC 5.5.1.1) Locus tag: CE2302 Name: catC Funciton: Muconolactone isomerase (EC 5.3.3.4)
	CE2304	catA	Protocatechuate 3,4-dioxygenase beta subunit (EC 1.13.11.1)
	CE2303	catB	Muconate cycloisomerase (EC 5.5.1.1)
	CE2302	catC	Muconolactone isomerase (EC 5.3.3.4)
Position: -174 Score: 5.4 Sequence: CCTAGGTTTTTCCCTAAT Locus tag: CE2305 Name: benA Funciton: Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10) Locus tag: CE2306 Name: benB Funciton: Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10) Locus tag: CE2307 Name: benC Funciton: benzoate dioxygenase, ferredoxin reductase component Locus tag: CE2308 Name: benD Funciton: 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25)
	CE2305	benA	Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)
	CE2306	benB	Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10)
	CE2307	benC	benzoate dioxygenase, ferredoxin reductase component
	CE2308	benD	1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD