Regulog LldR - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Lactate utilization |
| Effector: | L-lactate |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By trascription factor - LldR
- By TF family - GntR/Others
- By effector - L-lactate
- By pathway - Lactate utilization
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium amycolatum SK46 | ||
| Corynebacterium aurimucosum ATCC 700975 | ||
| Corynebacterium diphtheriae NCTC 13129 | 5 | 3 |
| Corynebacterium efficiens YS-314 | 8 | 3 |
| Corynebacterium glutamicum ATCC 13032 | 12 | 4 |
| Corynebacterium jeikeium K411 | ||
| Corynebacterium kroppenstedtii DSM 44385 | ||
| Corynebacterium urealyticum DSM 7109 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| lldE |
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Gene: cauri_1042: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -332 score = 3.9019 sequence = TTTGGGTGGACCACA Gene: DIP1032: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE |
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Gene: ckrop_1293: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE |
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Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE |
| lldF |
Gene: CORAM0001_0634: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF |
Gene: cauri_1041: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF |
Gene: DIP1031: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF |
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Gene: ckrop_1294: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF |
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Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF |
| lldG |
Gene: CORAM0001_0633: Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG |
Gene: cauri_1040: Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG |
Gene: DIP1030: Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG |
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Gene: ckrop_1295: Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG |
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Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG |
| CRON 2. | |||||||||
| ldhA |
Gene: CORAM0001_2074: L-lactate dehydrogenase (EC 1.1.1.27) |
Gene: cauri_2403: L-lactate dehydrogenase (EC 1.1.1.27) |
Gene: DIP2255: L-lactate dehydrogenase (EC 1.1.1.27) |
*
Corynebacterium efficiens YS-314 Site: position = -119 score = 4.82966 sequence = AGTGGTCCGGCCAGA Gene: CE2753: L-lactate dehydrogenase (EC 1.1.1.27) |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -137 score = 5.37601 sequence = CTTGGTCTGACCACA Gene: cg3219: L-lactate dehydrogenase (EC 1.1.1.27) |
Gene: jk0113: L-lactate dehydrogenase (EC 1.1.1.27) |
Gene: ckrop_0111: L-lactate dehydrogenase (EC 1.1.1.27) |
|
L-lactate dehydrogenase (EC 1.1.1.27) |
| CRON 3. | |||||||||
| cg3226 |
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*
Corynebacterium efficiens YS-314 Site: position = -14 score = 5.08265 sequence = CATGGCCTGACCACA Site: position = -27 score = 5.959 sequence = TGTGGTCTGACCACA Gene: CE2761: L-lactate permease, PF00083 family |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -77 score = 5.29164 sequence = TGTGGTCTGACCATG Gene: cg3226: L-lactate permease, PF00083 family |
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L-lactate permease, PF00083 family |
| lldD |
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Gene: cauri_0795: L-lactate dehydrogenase (EC 1.1.2.3) |
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Gene: CE2762: L-lactate dehydrogenase (EC 1.1.2.3) |
Gene: cg3227: L-lactate dehydrogenase (EC 1.1.2.3) |
Gene: jk1705: L-lactate dehydrogenase (EC 1.1.2.3) |
Gene: ckrop_0013: L-lactate dehydrogenase (EC 1.1.2.3) |
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L-lactate dehydrogenase (EC 1.1.2.3) |
| CRON 4. | |||||||||
| lldP |
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Gene: cauri_1046: L-lactate permease |
*2
Corynebacterium diphtheriae NCTC 13129 Site: position = -122 score = 5.37601 sequence = TGTGGTCTTACCACT Site: position = -108 score = 5.1022 sequence = TGTGGTCAGACCAAC Gene: DIP0012: L-lactate permease Site: position = -120 score = 4.95395 sequence = TGTGGTCCACCCAAA Gene: DIP1033: L-lactate permease |
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Gene: ckrop_0014: L-lactate permease |
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L-lactate permease |
| CRON 5. | |||||||||
| CE2754 |
Gene: CORAM0001_2075: conserved membrane-spanning protein |
Gene: cauri_2404: conserved membrane-spanning protein |
|
*
Corynebacterium efficiens YS-314 Site: position = -75 score = 3.9659 sequence = TCTGGCCGGACCACT Gene: CE2754: conserved membrane-spanning protein |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -106 score = 5.1022 sequence = TGTGGTCAGACCAAG Gene: cg3220: conserved membrane-spanning protein |
Gene: jk0028: conserved membrane-spanning protein |
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conserved membrane-spanning protein |
| CE2755 |
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Gene: cauri_0021: phosphoglycolate phosphatase |
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Gene: CE2755: phosphoglycolate phosphatase |
Gene: cg3221: phosphoglycolate phosphatase |
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phosphoglycolate phosphatase |
| CE2756 |
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Gene: CE2756: NADPH-dependent FMN reductase |
Gene: cg3223: NADPH-dependent FMN reductase |
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NADPH-dependent FMN reductase |
| lldR |
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Gene: CE2757: Lactate-responsive regulator LldR in Actinobacteria, GntR family |
Gene: cg3224: Lactate-responsive regulator LldR in Actinobacteria, GntR family |
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Lactate-responsive regulator LldR in Actinobacteria, GntR family |
| CE2758 |
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Gene: CE2758: hypothetical protein |
Gene: cg3225: hypothetical protein |
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hypothetical protein |
| CRON 6. | |||||||||
| fruR |
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Gene: CE1827: Fructose utilization transcriptional regulator FruR, DeoR family |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -110 score = 4.20305 sequence = TACGGTTCTTCCACA Gene: cg2118: Fructose utilization transcriptional regulator FruR, DeoR family |
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Fructose utilization transcriptional regulator FruR, DeoR family |
| pfkB |
Gene: CORAM0001_0855: 1-phosphofructokinase |
Gene: cauri_1480: 1-phosphofructokinase |
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Gene: CE1828: 1-phosphofructokinase |
Gene: cg2119: 1-phosphofructokinase |
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Gene: ckrop_1091: 1-phosphofructokinase |
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1-phosphofructokinase |
| ptsF |
Gene: CORAM0001_0854: Fructose-specific PTS, IIABC component |
Gene: cauri_1481: Fructose-specific PTS, IIABC component |
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Gene: CE1829: Fructose-specific PTS, IIABC component |
Gene: cg2120: Fructose-specific PTS, IIABC component |
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Gene: ckrop_1092: Fructose-specific PTS, IIABC component |
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Fructose-specific PTS, IIABC component |
| ptsH |
Gene: CORAM0001_0853: Phosphocarrier protein of PTS system |
Gene: cauri_1482: Phosphocarrier protein of PTS system |
Gene: DIP1435: Phosphocarrier protein of PTS system |
Gene: CE1830: Phosphocarrier protein of PTS system |
Gene: cg2121: Phosphocarrier protein of PTS system |
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Gene: ckrop_1094: Phosphocarrier protein of PTS system |
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Phosphocarrier protein of PTS system |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |