Regulog Cg2544 - Corynebacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Corynebacteriaceae
By TF family - GntR/Others

Statistics of regulated genes
Genome	Genes	Operons
Corynebacterium amycolatum SK46
Corynebacterium aurimucosum ATCC 700975
Corynebacterium diphtheriae NCTC 13129
Corynebacterium efficiens YS-314	8	2
Corynebacterium glutamicum ATCC 13032	4	2
Corynebacterium jeikeium K411
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium urealyticum DSM 7109

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
cg2543	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975	Corynebacterium diphtheriae NCTC 13129	* Corynebacterium efficiens YS-314 Site: position = -89 score = 6.04555 sequence = GACTAACATGTTACTG Gene: CE2222: Putative oxidoreductase	* Corynebacterium glutamicum ATCC 13032 Site: position = -54 score = 6.04555 sequence = CGGTAACATGTTACTC Gene: cg2543: Putative oxidoreductase	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109	Putative oxidoreductase
cg2542	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975	Corynebacterium diphtheriae NCTC 13129	Corynebacterium efficiens YS-314 Gene: CE2221: Putative permease	Corynebacterium glutamicum ATCC 13032 Gene: cg2542: Putative permease	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109	Putative permease
cg2541	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975	Corynebacterium diphtheriae NCTC 13129	Corynebacterium efficiens YS-314 Gene: CE2220: Conserved hypothetical protein	Corynebacterium glutamicum ATCC 13032 Gene: cg2540: Conserved hypothetical protein	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109	Conserved hypothetical protein

CRON 2.
cg2544	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975	Corynebacterium diphtheriae NCTC 13129	* Corynebacterium efficiens YS-314 Site: position = 56 score = 6.04555 sequence = CAGTAACATGTTAGTC Gene: CE2223: Predicted transcriptional regulator, GntR family	* Corynebacterium glutamicum ATCC 13032 Site: position = -40 score = 6.04555 sequence = GAGTAACATGTTACCG Gene: cg2544: Predicted transcriptional regulator, GntR family	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109	Predicted transcriptional regulator, GntR family
cg2549	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1826: Predicted ABC transporter, substrate-binding protein	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1740: Predicted ABC transporter, substrate-binding protein	Corynebacterium efficiens YS-314 Gene: CE2224: Predicted ABC transporter, substrate-binding protein	Corynebacterium glutamicum ATCC 13032 Gene: cg2549: Predicted ABC transporter, substrate-binding protein	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_1334: Predicted ABC transporter, substrate-binding protein	Corynebacterium urealyticum DSM 7109	Predicted ABC transporter, substrate-binding protein
cg2550	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1827: Predicted ABC transporter, permease protein 1	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1741: Predicted ABC transporter, permease protein 1	Corynebacterium efficiens YS-314 Gene: CE2225: Predicted ABC transporter, permease protein 1	Corynebacterium glutamicum ATCC 13032 Gene: cg2550: Predicted ABC transporter, permease protein 1	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_1335: Predicted ABC transporter, permease protein 1	Corynebacterium urealyticum DSM 7109	Predicted ABC transporter, permease protein 1
cg2551	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1828: Predicted ABC transporter, permease protein 2	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1742: Predicted ABC transporter, permease protein 2	Corynebacterium efficiens YS-314 Gene: CE2226: Predicted ABC transporter, permease protein 2	Corynebacterium glutamicum ATCC 13032 Gene: cg2551: Predicted ABC transporter, permease protein 2	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385	Corynebacterium urealyticum DSM 7109	Predicted ABC transporter, permease protein 2
cg2552	Corynebacterium amycolatum SK46	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1829: Predicted ABC transporter, ATP-binding protein	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1743: Predicted ABC transporter, ATP-binding protein	Corynebacterium efficiens YS-314 Gene: CE2227: Predicted ABC transporter, ATP-binding protein	Corynebacterium glutamicum ATCC 13032 Gene: cg2552: Predicted ABC transporter, ATP-binding protein	Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_1336: Predicted ABC transporter, ATP-binding protein	Corynebacterium urealyticum DSM 7109	Predicted ABC transporter, ATP-binding protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Cg2544 - Corynebacteriaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --