Regulog S15 - Corynebacteriaceae
| Regulator type: | RNA regulatory element |
| Name: | S15 |
| RFAM: | RF00114 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Actinobacteria |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By RNA motif - S15
- By pathway - Ribosome biogenesis
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium glutamicum ATCC 13032 | 1 | 1 |
| Corynebacterium efficiens YS-314 | 1 | 1 |
| Corynebacterium diphtheriae NCTC 13129 | 1 | 1 |
| Corynebacterium aurimucosum ATCC 700975 | 1 | 1 |
| Corynebacterium jeikeium K411 | ||
| Corynebacterium urealyticum DSM 7109 | 1 | 1 |
| Corynebacterium amycolatum SK46 | 1 | 1 |
| Corynebacterium kroppenstedtii DSM 44385 | 1 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| rpsO |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -65 score = 28.42 sequence = GGGTTTATCTTGGAT... Gene: cg2167: 30S ribosomal protein S15 |
*
Corynebacterium efficiens YS-314 Site: position = -52 score = 18.59 sequence = GGTGCGTGGTGAAAA... Gene: CE1869: 30S ribosomal protein S15 |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -60 score = 26.6 sequence = ATTTTGTAGCTAGAG... Gene: DIP1468: 30S ribosomal protein S15 |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -59 score = 25.69 sequence = CAGGCAGCGCCTTAA... Gene: cauri_1521: 30S ribosomal protein S15 |
Gene: jk1135: 30S ribosomal protein S15 |
*
Corynebacterium urealyticum DSM 7109 Site: position = -51 score = 14.84 sequence = GGGCAGTCTTTAAGA... Gene: cur_0858: 30S ribosomal protein S15 |
*
Corynebacterium amycolatum SK46 Site: position = -49 score = 13.7 sequence = ATGTGGACTGAAACA... Gene: CORAM0001_0816: 30S ribosomal protein S15 |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -74 score = 34.25 sequence = TTGTGAAAGCTGTGC... Gene: ckrop_1135: 30S ribosomal protein S15 |
30S ribosomal protein S15 |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |