Regulons of Corynebacterium amycolatum SK46

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AcnR	Citrate	Tricarboxylic acid cycle	1	1
TF	ArgR	Arginine	Arginine biosynthesis	2	2
TF	BioQ	Biotin	Biotin biosynthesis	5	4
TF	BioQ	Biotin	Biotin biosynthesis	4	3
TF	CadR	Cadmium, ion (Cd2+)	Cadmium resistance	1	3
TF	Cg0454		Multidrug resistance	1	2
TF	Cg1143			2	2
TF	Cg1211		Metabolite transport	2	4
TF	Cg3261		Multidrug resistance; Multidrug efflux	1	1
TF	ClgR	DNA damage	Proteolysis	8	4
TF	CsoR	Copper ion, (Cu+)	Copper resistance	1	1
TF	DtxR	Iron ion, (Fe2+)	Iron homeostasis	15	9
TF	FasR		Fatty acid biosynthesis	3	2
TF	GlxR	Cyclic 3',5'-AMP	Energy metabolism; Carbohydrate metabolism	89	45
TF	HrcA	Heat shock	Heat shock response	2	4
TF	HspR	Heat shock	Heat shock response	2	3
TF	LexA	DNA damage	SOS response	17	12
TF	LtbR		Tryptophan biosynthesis; Leucine biosynthesis	4	4
TF	McbR	S-adenosylmethionine; S-adenosylhomocysteine	Methionine biosynthesis	21	21
TF	MntR	Manganese ion, (Mn2+)	Manganese homeostasis	2	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	3
TF	QacR		Drug resistance	1	1
TF	RosR	Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)	Peroxide stress response	6	4
TF	SsuR	Sulfite; Sulfate	Sulfur metabolism	2	2
TF	SufR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	3	3
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	3	2
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	S15		Ribosome biogenesis	1	1
RNA	T-box(Ile)	Ile-tRNA	Amino acid metabolism	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	4	2
RNA	ydaO-yuaA		Cell wall metabolism	2	1
RNA	ykoK	Magnesium ion, (Mg2+)	Magnesium homeostasis	1	1
RNA	yybP-ykoY			1	1

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --